533112afe2a2005e80cdb1f82904ea65032d4302
braney
  Sat Oct 2 11:37:34 2021 -0700
split hg/lib into two separate libaries, one only used by the cgis

diff --git src/hg/cgilib/affy10KDetails.c src/hg/cgilib/affy10KDetails.c
new file mode 100644
index 0000000..d1d6bcc
--- /dev/null
+++ src/hg/cgilib/affy10KDetails.c
@@ -0,0 +1,204 @@
+/* affy10KDetails.c was originally generated by the autoSql program, which also 
+ * generated affy10KDetails.h and affy10KDetails.sql.  This module links the database and
+ * the RAM representation of objects. */
+
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
+#include "common.h"
+#include "linefile.h"
+#include "dystring.h"
+#include "jksql.h"
+#include "affy10KDetails.h"
+
+
+void affy10KDetailsStaticLoad(char **row, struct affy10KDetails *ret)
+/* Load a row from affy10KDetails table into ret.  The contents of ret will
+ * be replaced at the next call to this function. */
+{
+ret->affyId = row[0];
+ret->rsId = row[1];
+ret->tscId = row[2];
+strcpy(ret->baseA, row[3]);
+strcpy(ret->baseB, row[4]);
+strcpy(ret->sequenceA, row[5]);
+strcpy(ret->sequenceB, row[6]);
+strcpy(ret->enzyme, row[7]);
+}
+
+struct affy10KDetails *affy10KDetailsLoad(char **row)
+/* Load a affy10KDetails from row fetched with select * from affy10KDetails
+ * from database.  Dispose of this with affy10KDetailsFree(). */
+{
+struct affy10KDetails *ret;
+
+AllocVar(ret);
+ret->affyId = cloneString(row[0]);
+ret->rsId = cloneString(row[1]);
+ret->tscId = cloneString(row[2]);
+strcpy(ret->baseA, row[3]);
+strcpy(ret->baseB, row[4]);
+strcpy(ret->sequenceA, row[5]);
+strcpy(ret->sequenceB, row[6]);
+strcpy(ret->enzyme, row[7]);
+return ret;
+}
+
+struct affy10KDetails *affy10KDetailsLoadAll(char *fileName) 
+/* Load all affy10KDetails from a whitespace-separated file.
+ * Dispose of this with affy10KDetailsFreeList(). */
+{
+struct affy10KDetails *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[8];
+
+while (lineFileRow(lf, row))
+    {
+    el = affy10KDetailsLoad(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct affy10KDetails *affy10KDetailsLoadAllByChar(char *fileName, char chopper) 
+/* Load all affy10KDetails from a chopper separated file.
+ * Dispose of this with affy10KDetailsFreeList(). */
+{
+struct affy10KDetails *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[8];
+
+while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
+    {
+    el = affy10KDetailsLoad(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct affy10KDetails *affy10KDetailsLoadByQuery(struct sqlConnection *conn, char *query)
+/* Load all affy10KDetails from table that satisfy the query given.  
+ * Where query is of the form 'select * from example where something=something'
+ * or 'select example.* from example, anotherTable where example.something = 
+ * anotherTable.something'.
+ * Dispose of this with affy10KDetailsFreeList(). */
+{
+struct affy10KDetails *list = NULL, *el;
+struct sqlResult *sr;
+char **row;
+
+sr = sqlGetResult(conn, query);
+while ((row = sqlNextRow(sr)) != NULL)
+    {
+    el = affy10KDetailsLoad(row);
+    slAddHead(&list, el);
+    }
+slReverse(&list);
+sqlFreeResult(&sr);
+return list;
+}
+
+void affy10KDetailsSaveToDb(struct sqlConnection *conn, struct affy10KDetails *el, char *tableName, int updateSize)
+/* Save affy10KDetails as a row to the table specified by tableName. 
+ * As blob fields may be arbitrary size updateSize specifies the approx size
+ * of a string that would contain the entire query. Arrays of native types are
+ * converted to comma separated strings and loaded as such, User defined types are
+ * inserted as NULL. Strings are automatically escaped to allow insertion into the database. */
+{
+struct dyString *update = newDyString(updateSize);
+sqlDyStringPrintf(update, "insert into %s values ( '%s','%s','%s','%s','%s','%s','%s','%s')", 
+	tableName,  el->affyId,  el->rsId,  el->tscId,  el->baseA,  el->baseB,  el->sequenceA,  el->sequenceB,  el->enzyme);
+sqlUpdate(conn, update->string);
+freeDyString(&update);
+}
+
+struct affy10KDetails *affy10KDetailsCommaIn(char **pS, struct affy10KDetails *ret)
+/* Create a affy10KDetails out of a comma separated string. 
+ * This will fill in ret if non-null, otherwise will
+ * return a new affy10KDetails */
+{
+char *s = *pS;
+
+if (ret == NULL)
+    AllocVar(ret);
+ret->affyId = sqlStringComma(&s);
+ret->rsId = sqlStringComma(&s);
+ret->tscId = sqlStringComma(&s);
+sqlFixedStringComma(&s, ret->baseA, sizeof(ret->baseA));
+sqlFixedStringComma(&s, ret->baseB, sizeof(ret->baseB));
+sqlFixedStringComma(&s, ret->sequenceA, sizeof(ret->sequenceA));
+sqlFixedStringComma(&s, ret->sequenceB, sizeof(ret->sequenceB));
+sqlFixedStringComma(&s, ret->enzyme, sizeof(ret->enzyme));
+*pS = s;
+return ret;
+}
+
+void affy10KDetailsFree(struct affy10KDetails **pEl)
+/* Free a single dynamically allocated affy10KDetails such as created
+ * with affy10KDetailsLoad(). */
+{
+struct affy10KDetails *el;
+
+if ((el = *pEl) == NULL) return;
+freeMem(el->affyId);
+freeMem(el->rsId);
+freeMem(el->tscId);
+freez(pEl);
+}
+
+void affy10KDetailsFreeList(struct affy10KDetails **pList)
+/* Free a list of dynamically allocated affy10KDetails's */
+{
+struct affy10KDetails *el, *next;
+
+for (el = *pList; el != NULL; el = next)
+    {
+    next = el->next;
+    affy10KDetailsFree(&el);
+    }
+*pList = NULL;
+}
+
+void affy10KDetailsOutput(struct affy10KDetails *el, FILE *f, char sep, char lastSep) 
+/* Print out affy10KDetails.  Separate fields with sep. Follow last field with lastSep. */
+{
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->affyId);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->rsId);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->tscId);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->baseA);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->baseB);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->sequenceA);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->sequenceB);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->enzyme);
+if (sep == ',') fputc('"',f);
+fputc(lastSep,f);
+}
+
+/* -------------------------------- End autoSql Generated Code -------------------------------- */
+