533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/cgilib/ancientRref.c src/hg/cgilib/ancientRref.c new file mode 100644 index 0000000..b13855b --- /dev/null +++ src/hg/cgilib/ancientRref.c @@ -0,0 +1,137 @@ +/* ancientRref.c was originally generated by the autoSql program, which also + * generated ancientRref.h and ancientRref.sql. This module links the database and + * the RAM representation of objects. */ + +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + +#include "common.h" +#include "linefile.h" +#include "jksql.h" +#include "ancientRref.h" + + +void ancientRrefStaticLoad(char **row, struct ancientRref *ret) +/* Load a row from ancientRref table into ret. The contents of ret will + * be replaced at the next call to this function. */ +{ + +ret->id = row[0]; +ret->name = row[1]; +ret->class = row[2]; +ret->family = row[3]; +ret->hseq = row[4]; +ret->mseq = row[5]; +} + +struct ancientRref *ancientRrefLoad(char **row) +/* Load a ancientRref from row fetched with select * from ancientRref + * from database. Dispose of this with ancientRrefFree(). */ +{ +struct ancientRref *ret; + +AllocVar(ret); +ret->id = cloneString(row[0]); +ret->name = cloneString(row[1]); +ret->class = cloneString(row[2]); +ret->family = cloneString(row[3]); +ret->hseq = cloneString(row[4]); +ret->mseq = cloneString(row[5]); +return ret; +} + +struct ancientRref *ancientRrefLoadAll(char *fileName) +/* Load all ancientRref from a tab-separated file. + * Dispose of this with ancientRrefFreeList(). */ +{ +struct ancientRref *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[6]; + +while (lineFileRow(lf, row)) + { + el = ancientRrefLoad(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct ancientRref *ancientRrefCommaIn(char **pS, struct ancientRref *ret) +/* Create a ancientRref out of a comma separated string. + * This will fill in ret if non-null, otherwise will + * return a new ancientRref */ +{ +char *s = *pS; + +if (ret == NULL) + AllocVar(ret); +ret->id = sqlStringComma(&s); +ret->name = sqlStringComma(&s); +ret->class = sqlStringComma(&s); +ret->family = sqlStringComma(&s); +ret->hseq = sqlStringComma(&s); +ret->mseq = sqlStringComma(&s); +*pS = s; +return ret; +} + +void ancientRrefFree(struct ancientRref **pEl) +/* Free a single dynamically allocated ancientRref such as created + * with ancientRrefLoad(). */ +{ +struct ancientRref *el; + +if ((el = *pEl) == NULL) return; +freeMem(el->id); +freeMem(el->name); +freeMem(el->class); +freeMem(el->family); +freeMem(el->hseq); +freeMem(el->mseq); +freez(pEl); +} + +void ancientRrefFreeList(struct ancientRref **pList) +/* Free a list of dynamically allocated ancientRref's */ +{ +struct ancientRref *el, *next; + +for (el = *pList; el != NULL; el = next) + { + next = el->next; + ancientRrefFree(&el); + } +*pList = NULL; +} + +void ancientRrefOutput(struct ancientRref *el, FILE *f, char sep, char lastSep) +/* Print out ancientRref. Separate fields with sep. Follow last field with lastSep. */ +{ +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->id); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->name); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->class); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->family); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->hseq); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->mseq); +if (sep == ',') fputc('"',f); +fputc(lastSep,f); +} +