533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/cgilib/bgiGeneInfo.c src/hg/cgilib/bgiGeneInfo.c new file mode 100644 index 0000000..7412eea --- /dev/null +++ src/hg/cgilib/bgiGeneInfo.c @@ -0,0 +1,141 @@ +/* bgiGeneInfo.c was originally generated by the autoSql program, which also + * generated bgiGeneInfo.h and bgiGeneInfo.sql. This module links the database and + * the RAM representation of objects. */ + +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + +#include "common.h" +#include "linefile.h" +#include "dystring.h" +#include "jksql.h" +#include "bgiGeneInfo.h" + + +void bgiGeneInfoStaticLoad(char **row, struct bgiGeneInfo *ret) +/* Load a row from bgiGeneInfo table into ret. The contents of ret will + * be replaced at the next call to this function. */ +{ +ret->name = row[0]; +ret->source = row[1]; +ret->go = row[2]; +ret->ipr = row[3]; +} + +struct bgiGeneInfo *bgiGeneInfoLoad(char **row) +/* Load a bgiGeneInfo from row fetched with select * from bgiGeneInfo + * from database. Dispose of this with bgiGeneInfoFree(). */ +{ +struct bgiGeneInfo *ret; + +AllocVar(ret); +ret->name = cloneString(row[0]); +ret->source = cloneString(row[1]); +ret->go = cloneString(row[2]); +ret->ipr = cloneString(row[3]); +return ret; +} + +struct bgiGeneInfo *bgiGeneInfoLoadAll(char *fileName) +/* Load all bgiGeneInfo from a whitespace-separated file. + * Dispose of this with bgiGeneInfoFreeList(). */ +{ +struct bgiGeneInfo *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[4]; + +while (lineFileRow(lf, row)) + { + el = bgiGeneInfoLoad(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct bgiGeneInfo *bgiGeneInfoLoadAllByChar(char *fileName, char chopper) +/* Load all bgiGeneInfo from a chopper separated file. + * Dispose of this with bgiGeneInfoFreeList(). */ +{ +struct bgiGeneInfo *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[4]; + +while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) + { + el = bgiGeneInfoLoad(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct bgiGeneInfo *bgiGeneInfoCommaIn(char **pS, struct bgiGeneInfo *ret) +/* Create a bgiGeneInfo out of a comma separated string. + * This will fill in ret if non-null, otherwise will + * return a new bgiGeneInfo */ +{ +char *s = *pS; + +if (ret == NULL) + AllocVar(ret); +ret->name = sqlStringComma(&s); +ret->source = sqlStringComma(&s); +ret->go = sqlStringComma(&s); +ret->ipr = sqlStringComma(&s); +*pS = s; +return ret; +} + +void bgiGeneInfoFree(struct bgiGeneInfo **pEl) +/* Free a single dynamically allocated bgiGeneInfo such as created + * with bgiGeneInfoLoad(). */ +{ +struct bgiGeneInfo *el; + +if ((el = *pEl) == NULL) return; +freeMem(el->name); +freeMem(el->source); +freeMem(el->go); +freeMem(el->ipr); +freez(pEl); +} + +void bgiGeneInfoFreeList(struct bgiGeneInfo **pList) +/* Free a list of dynamically allocated bgiGeneInfo's */ +{ +struct bgiGeneInfo *el, *next; + +for (el = *pList; el != NULL; el = next) + { + next = el->next; + bgiGeneInfoFree(&el); + } +*pList = NULL; +} + +void bgiGeneInfoOutput(struct bgiGeneInfo *el, FILE *f, char sep, char lastSep) +/* Print out bgiGeneInfo. Separate fields with sep. Follow last field with lastSep. */ +{ +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->name); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->source); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->go); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->ipr); +if (sep == ',') fputc('"',f); +fputc(lastSep,f); +} + +/* -------------------------------- End autoSql Generated Code -------------------------------- */ +