533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/cgilib/cnpSebat2.c src/hg/cgilib/cnpSebat2.c new file mode 100644 index 0000000..e310ee6 --- /dev/null +++ src/hg/cgilib/cnpSebat2.c @@ -0,0 +1,141 @@ +/* cnpSebat2.c was originally generated by the autoSql program, which also + * generated cnpSebat2.h and cnpSebat2.sql. This module links the database and + * the RAM representation of objects. */ + +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + +#include "common.h" +#include "linefile.h" +#include "dystring.h" +#include "jksql.h" +#include "cnpSebat2.h" + + +void cnpSebat2StaticLoad(char **row, struct cnpSebat2 *ret) +/* Load a row from cnpSebat2 table into ret. The contents of ret will + * be replaced at the next call to this function. */ +{ + +ret->chrom = row[0]; +ret->chromStart = sqlUnsigned(row[1]); +ret->chromEnd = sqlUnsigned(row[2]); +ret->name = row[3]; +ret->probes = sqlUnsigned(row[4]); +} + +struct cnpSebat2 *cnpSebat2Load(char **row) +/* Load a cnpSebat2 from row fetched with select * from cnpSebat2 + * from database. Dispose of this with cnpSebat2Free(). */ +{ +struct cnpSebat2 *ret; + +AllocVar(ret); +ret->chrom = cloneString(row[0]); +ret->chromStart = sqlUnsigned(row[1]); +ret->chromEnd = sqlUnsigned(row[2]); +ret->name = cloneString(row[3]); +ret->probes = sqlUnsigned(row[4]); +return ret; +} + +struct cnpSebat2 *cnpSebat2LoadAll(char *fileName) +/* Load all cnpSebat2 from a whitespace-separated file. + * Dispose of this with cnpSebat2FreeList(). */ +{ +struct cnpSebat2 *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[5]; + +while (lineFileRow(lf, row)) + { + el = cnpSebat2Load(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct cnpSebat2 *cnpSebat2LoadAllByChar(char *fileName, char chopper) +/* Load all cnpSebat2 from a chopper separated file. + * Dispose of this with cnpSebat2FreeList(). */ +{ +struct cnpSebat2 *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[5]; + +while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) + { + el = cnpSebat2Load(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct cnpSebat2 *cnpSebat2CommaIn(char **pS, struct cnpSebat2 *ret) +/* Create a cnpSebat2 out of a comma separated string. + * This will fill in ret if non-null, otherwise will + * return a new cnpSebat2 */ +{ +char *s = *pS; + +if (ret == NULL) + AllocVar(ret); +ret->chrom = sqlStringComma(&s); +ret->chromStart = sqlUnsignedComma(&s); +ret->chromEnd = sqlUnsignedComma(&s); +ret->name = sqlStringComma(&s); +ret->probes = sqlUnsignedComma(&s); +*pS = s; +return ret; +} + +void cnpSebat2Free(struct cnpSebat2 **pEl) +/* Free a single dynamically allocated cnpSebat2 such as created + * with cnpSebat2Load(). */ +{ +struct cnpSebat2 *el; + +if ((el = *pEl) == NULL) return; +freeMem(el->chrom); +freeMem(el->name); +freez(pEl); +} + +void cnpSebat2FreeList(struct cnpSebat2 **pList) +/* Free a list of dynamically allocated cnpSebat2's */ +{ +struct cnpSebat2 *el, *next; + +for (el = *pList; el != NULL; el = next) + { + next = el->next; + cnpSebat2Free(&el); + } +*pList = NULL; +} + +void cnpSebat2Output(struct cnpSebat2 *el, FILE *f, char sep, char lastSep) +/* Print out cnpSebat2. Separate fields with sep. Follow last field with lastSep. */ +{ +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->chrom); +if (sep == ',') fputc('"',f); +fputc(sep,f); +fprintf(f, "%u", el->chromStart); +fputc(sep,f); +fprintf(f, "%u", el->chromEnd); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->name); +if (sep == ',') fputc('"',f); +fputc(sep,f); +fprintf(f, "%u", el->probes); +fputc(lastSep,f); +} + +/* -------------------------------- End autoSql Generated Code -------------------------------- */ +