533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/cgilib/ensInfo.c src/hg/cgilib/ensInfo.c new file mode 100644 index 0000000..66804a7 --- /dev/null +++ src/hg/cgilib/ensInfo.c @@ -0,0 +1,158 @@ +/* ensInfo.c was originally generated by the autoSql program, which also + * generated ensInfo.h and ensInfo.sql. This module links the database and + * the RAM representation of objects. */ + +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + +#include "common.h" +#include "linefile.h" +#include "dystring.h" +#include "jksql.h" +#include "ensInfo.h" + + +void ensInfoStaticLoad(char **row, struct ensInfo *ret) +/* Load a row from ensInfo table into ret. The contents of ret will + * be replaced at the next call to this function. */ +{ + +ret->name = row[0]; +ret->otherId = row[1]; +ret->geneId = row[2]; +ret->class = row[3]; +ret->geneDesc = row[4]; +ret->status = row[5]; +} + +struct ensInfo *ensInfoLoad(char **row) +/* Load a ensInfo from row fetched with select * from ensInfo + * from database. Dispose of this with ensInfoFree(). */ +{ +struct ensInfo *ret; + +AllocVar(ret); +ret->name = cloneString(row[0]); +ret->otherId = cloneString(row[1]); +ret->geneId = cloneString(row[2]); +ret->class = cloneString(row[3]); +ret->geneDesc = cloneString(row[4]); +ret->status = cloneString(row[5]); +return ret; +} + +struct ensInfo *ensInfoLoadAll(char *fileName) +/* Load all ensInfo from a whitespace-separated file. + * Dispose of this with ensInfoFreeList(). */ +{ +struct ensInfo *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[6]; + +while (lineFileRow(lf, row)) + { + el = ensInfoLoad(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct ensInfo *ensInfoLoadAllByChar(char *fileName, char chopper) +/* Load all ensInfo from a chopper separated file. + * Dispose of this with ensInfoFreeList(). */ +{ +struct ensInfo *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[6]; + +while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) + { + el = ensInfoLoad(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct ensInfo *ensInfoCommaIn(char **pS, struct ensInfo *ret) +/* Create a ensInfo out of a comma separated string. + * This will fill in ret if non-null, otherwise will + * return a new ensInfo */ +{ +char *s = *pS; + +if (ret == NULL) + AllocVar(ret); +ret->name = sqlStringComma(&s); +ret->otherId = sqlStringComma(&s); +ret->geneId = sqlStringComma(&s); +ret->class = sqlStringComma(&s); +ret->geneDesc = sqlStringComma(&s); +ret->status = sqlStringComma(&s); +*pS = s; +return ret; +} + +void ensInfoFree(struct ensInfo **pEl) +/* Free a single dynamically allocated ensInfo such as created + * with ensInfoLoad(). */ +{ +struct ensInfo *el; + +if ((el = *pEl) == NULL) return; +freeMem(el->name); +freeMem(el->otherId); +freeMem(el->geneId); +freeMem(el->class); +freeMem(el->geneDesc); +freeMem(el->status); +freez(pEl); +} + +void ensInfoFreeList(struct ensInfo **pList) +/* Free a list of dynamically allocated ensInfo's */ +{ +struct ensInfo *el, *next; + +for (el = *pList; el != NULL; el = next) + { + next = el->next; + ensInfoFree(&el); + } +*pList = NULL; +} + +void ensInfoOutput(struct ensInfo *el, FILE *f, char sep, char lastSep) +/* Print out ensInfo. Separate fields with sep. Follow last field with lastSep. */ +{ +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->name); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->otherId); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->geneId); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->class); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->geneDesc); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->status); +if (sep == ',') fputc('"',f); +fputc(lastSep,f); +} + +/* -------------------------------- End autoSql Generated Code -------------------------------- */ +