533112afe2a2005e80cdb1f82904ea65032d4302
braney
  Sat Oct 2 11:37:34 2021 -0700
split hg/lib into two separate libaries, one only used by the cgis

diff --git src/hg/cgilib/flyreg2.c src/hg/cgilib/flyreg2.c
new file mode 100644
index 0000000..f0472fc
--- /dev/null
+++ src/hg/cgilib/flyreg2.c
@@ -0,0 +1,154 @@
+/* flyreg2.c was originally generated by the autoSql program, which also 
+ * generated flyreg2.h and flyreg2.sql.  This module links the database and
+ * the RAM representation of objects. */
+
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
+#include "common.h"
+#include "linefile.h"
+#include "dystring.h"
+#include "jksql.h"
+#include "flyreg2.h"
+
+
+void flyreg2StaticLoad(char **row, struct flyreg2 *ret)
+/* Load a row from flyreg2 table into ret.  The contents of ret will
+ * be replaced at the next call to this function. */
+{
+
+ret->chrom = row[0];
+ret->chromStart = sqlUnsigned(row[1]);
+ret->chromEnd = sqlUnsigned(row[2]);
+ret->name = row[3];
+ret->target = row[4];
+ret->pmid = sqlUnsigned(row[5]);
+ret->fpid = sqlUnsigned(row[6]);
+}
+
+struct flyreg2 *flyreg2Load(char **row)
+/* Load a flyreg2 from row fetched with select * from flyreg2
+ * from database.  Dispose of this with flyreg2Free(). */
+{
+struct flyreg2 *ret;
+
+AllocVar(ret);
+ret->chrom = cloneString(row[0]);
+ret->chromStart = sqlUnsigned(row[1]);
+ret->chromEnd = sqlUnsigned(row[2]);
+ret->name = cloneString(row[3]);
+ret->target = cloneString(row[4]);
+ret->pmid = sqlUnsigned(row[5]);
+ret->fpid = sqlUnsigned(row[6]);
+return ret;
+}
+
+struct flyreg2 *flyreg2LoadAll(char *fileName) 
+/* Load all flyreg2 from a whitespace-separated file.
+ * Dispose of this with flyreg2FreeList(). */
+{
+struct flyreg2 *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[7];
+
+while (lineFileRow(lf, row))
+    {
+    el = flyreg2Load(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct flyreg2 *flyreg2LoadAllByChar(char *fileName, char chopper) 
+/* Load all flyreg2 from a chopper separated file.
+ * Dispose of this with flyreg2FreeList(). */
+{
+struct flyreg2 *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[7];
+
+while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
+    {
+    el = flyreg2Load(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct flyreg2 *flyreg2CommaIn(char **pS, struct flyreg2 *ret)
+/* Create a flyreg2 out of a comma separated string. 
+ * This will fill in ret if non-null, otherwise will
+ * return a new flyreg2 */
+{
+char *s = *pS;
+
+if (ret == NULL)
+    AllocVar(ret);
+ret->chrom = sqlStringComma(&s);
+ret->chromStart = sqlUnsignedComma(&s);
+ret->chromEnd = sqlUnsignedComma(&s);
+ret->name = sqlStringComma(&s);
+ret->target = sqlStringComma(&s);
+ret->pmid = sqlUnsignedComma(&s);
+ret->fpid = sqlUnsignedComma(&s);
+*pS = s;
+return ret;
+}
+
+void flyreg2Free(struct flyreg2 **pEl)
+/* Free a single dynamically allocated flyreg2 such as created
+ * with flyreg2Load(). */
+{
+struct flyreg2 *el;
+
+if ((el = *pEl) == NULL) return;
+freeMem(el->chrom);
+freeMem(el->name);
+freeMem(el->target);
+freez(pEl);
+}
+
+void flyreg2FreeList(struct flyreg2 **pList)
+/* Free a list of dynamically allocated flyreg2's */
+{
+struct flyreg2 *el, *next;
+
+for (el = *pList; el != NULL; el = next)
+    {
+    next = el->next;
+    flyreg2Free(&el);
+    }
+*pList = NULL;
+}
+
+void flyreg2Output(struct flyreg2 *el, FILE *f, char sep, char lastSep) 
+/* Print out flyreg2.  Separate fields with sep. Follow last field with lastSep. */
+{
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->chrom);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%u", el->chromStart);
+fputc(sep,f);
+fprintf(f, "%u", el->chromEnd);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->name);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->target);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%u", el->pmid);
+fputc(sep,f);
+fprintf(f, "%u", el->fpid);
+fputc(lastSep,f);
+}
+
+/* -------------------------------- End autoSql Generated Code -------------------------------- */
+