533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/cgilib/mapSts.c src/hg/cgilib/mapSts.c new file mode 100644 index 0000000..9358157 --- /dev/null +++ src/hg/cgilib/mapSts.c @@ -0,0 +1,135 @@ +/* mapSts.c was originally generated by the autoSql program, which also + * generated mapSts.h and mapSts.sql. This module links the database and the RAM + * representation of objects. */ + +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + +#include "common.h" +#include "jksql.h" +#include "mapSts.h" + + +void mapStsStaticLoad(char **row, struct mapSts *ret) +/* Load a row from mapSts table into ret. The contents of ret will + * be replaced at the next call to this function. */ +{ + +ret->chrom = row[0]; +ret->chromStart = sqlUnsigned(row[1]); +ret->chromEnd = sqlUnsigned(row[2]); +ret->name = row[3]; +ret->score = sqlUnsigned(row[4]); +ret->identNo = sqlUnsigned(row[5]); +ret->rhChrom = row[6]; +ret->distance = atof(row[7]); +ret->ctgAcc = row[8]; +ret->otherAcc = row[9]; +} + +struct mapSts *mapStsLoad(char **row) +/* Load a mapSts from row fetched with select * from mapSts + * from database. Dispose of this with mapStsFree(). */ +{ +struct mapSts *ret; + +AllocVar(ret); +ret->chrom = cloneString(row[0]); +ret->chromStart = sqlUnsigned(row[1]); +ret->chromEnd = sqlUnsigned(row[2]); +ret->name = cloneString(row[3]); +ret->score = sqlUnsigned(row[4]); +ret->identNo = sqlUnsigned(row[5]); +ret->rhChrom = cloneString(row[6]); +ret->distance = atof(row[7]); +ret->ctgAcc = cloneString(row[8]); +ret->otherAcc = cloneString(row[9]); +return ret; +} + +struct mapSts *mapStsCommaIn(char **pS, struct mapSts *ret) +/* Create a mapSts out of a comma separated string. + * This will fill in ret if non-null, otherwise will + * return a new mapSts */ +{ +char *s = *pS; + +if (ret == NULL) + AllocVar(ret); +ret->chrom = sqlStringComma(&s); +ret->chromStart = sqlUnsignedComma(&s); +ret->chromEnd = sqlUnsignedComma(&s); +ret->name = sqlStringComma(&s); +ret->score = sqlUnsignedComma(&s); +ret->identNo = sqlUnsignedComma(&s); +ret->rhChrom = sqlStringComma(&s); +ret->distance = sqlSignedComma(&s); +ret->ctgAcc = sqlStringComma(&s); +ret->otherAcc = sqlStringComma(&s); +*pS = s; +return ret; +} + +void mapStsFree(struct mapSts **pEl) +/* Free a single dynamically allocated mapSts such as created + * with mapStsLoad(). */ +{ +struct mapSts *el; + +if ((el = *pEl) == NULL) return; +freeMem(el->chrom); +freeMem(el->name); +freeMem(el->rhChrom); +freeMem(el->ctgAcc); +freeMem(el->otherAcc); +freez(pEl); +} + +void mapStsFreeList(struct mapSts **pList) +/* Free a list of dynamically allocated mapSts's */ +{ +struct mapSts *el, *next; + +for (el = *pList; el != NULL; el = next) + { + next = el->next; + mapStsFree(&el); + } +*pList = NULL; +} + +void mapStsOutput(struct mapSts *el, FILE *f, char sep, char lastSep) +/* Print out mapSts. Separate fields with sep. Follow last field with lastSep. */ +{ +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->chrom); +if (sep == ',') fputc('"',f); +fputc(sep,f); +fprintf(f, "%u", el->chromStart); +fputc(sep,f); +fprintf(f, "%u", el->chromEnd); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->name); +if (sep == ',') fputc('"',f); +fputc(sep,f); +fprintf(f, "%u", el->score); +fputc(sep,f); +fprintf(f, "%u", el->identNo); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->rhChrom); +if (sep == ',') fputc('"',f); +fputc(sep,f); +fprintf(f, "%f", el->distance); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->ctgAcc); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->otherAcc); +if (sep == ',') fputc('"',f); +fputc(lastSep,f); +} +