533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/cgilib/mouseSyn.c src/hg/cgilib/mouseSyn.c new file mode 100644 index 0000000..d76ecb3 --- /dev/null +++ src/hg/cgilib/mouseSyn.c @@ -0,0 +1,101 @@ +/* mouseSyn.c was originally generated by the autoSql program, which also + * generated mouseSyn.h and mouseSyn.sql. This module links the database and the RAM + * representation of objects. */ + +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + +#include "common.h" +#include "jksql.h" +#include "mouseSyn.h" + + +void mouseSynStaticLoad(char **row, struct mouseSyn *ret) +/* Load a row from mouseSyn table into ret. The contents of ret will + * be replaced at the next call to this function. */ +{ + +ret->chrom = row[0]; +ret->chromStart = sqlUnsigned(row[1]); +ret->chromEnd = sqlUnsigned(row[2]); +ret->name = row[3]; +ret->segment = sqlSigned(row[4]); +} + +struct mouseSyn *mouseSynLoad(char **row) +/* Load a mouseSyn from row fetched with select * from mouseSyn + * from database. Dispose of this with mouseSynFree(). */ +{ +struct mouseSyn *ret; + +AllocVar(ret); +ret->chrom = cloneString(row[0]); +ret->chromStart = sqlUnsigned(row[1]); +ret->chromEnd = sqlUnsigned(row[2]); +ret->name = cloneString(row[3]); +ret->segment = sqlSigned(row[4]); +return ret; +} + +struct mouseSyn *mouseSynCommaIn(char **pS, struct mouseSyn *ret) +/* Create a mouseSyn out of a comma separated string. + * This will fill in ret if non-null, otherwise will + * return a new mouseSyn */ +{ +char *s = *pS; + +if (ret == NULL) + AllocVar(ret); +ret->chrom = sqlStringComma(&s); +ret->chromStart = sqlUnsignedComma(&s); +ret->chromEnd = sqlUnsignedComma(&s); +ret->name = sqlStringComma(&s); +ret->segment = sqlSignedComma(&s); +*pS = s; +return ret; +} + +void mouseSynFree(struct mouseSyn **pEl) +/* Free a single dynamically allocated mouseSyn such as created + * with mouseSynLoad(). */ +{ +struct mouseSyn *el; + +if ((el = *pEl) == NULL) return; +freeMem(el->chrom); +freeMem(el->name); +freez(pEl); +} + +void mouseSynFreeList(struct mouseSyn **pList) +/* Free a list of dynamically allocated mouseSyn's */ +{ +struct mouseSyn *el, *next; + +for (el = *pList; el != NULL; el = next) + { + next = el->next; + mouseSynFree(&el); + } +*pList = NULL; +} + +void mouseSynOutput(struct mouseSyn *el, FILE *f, char sep, char lastSep) +/* Print out mouseSyn. Separate fields with sep. Follow last field with lastSep. */ +{ +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->chrom); +if (sep == ',') fputc('"',f); +fputc(sep,f); +fprintf(f, "%u", el->chromStart); +fputc(sep,f); +fprintf(f, "%u", el->chromEnd); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->name); +if (sep == ',') fputc('"',f); +fputc(sep,f); +fprintf(f, "%d", el->segment); +fputc(lastSep,f); +} +