533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/cgilib/omimTitle.c src/hg/cgilib/omimTitle.c new file mode 100644 index 0000000..2375210 --- /dev/null +++ src/hg/cgilib/omimTitle.c @@ -0,0 +1,138 @@ +/* omimTitle.c was originally generated by the autoSql program, which also + * generated omimTitle.h and omimTitle.sql. This module links the database and + * the RAM representation of objects. */ + +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + +#include "common.h" +#include "linefile.h" +#include "dystring.h" +#include "jksql.h" +#include "omimTitle.h" + + +void omimTitleStaticLoad(char **row, struct omimTitle *ret) +/* Load a row from omimTitle table into ret. The contents of ret will + * be replaced at the next call to this function. */ +{ + +ret->omimId = sqlSigned(row[0]); +strcpy(ret->type, row[1]); +ret->geneSymbol = row[2]; +ret->title = row[3]; +} + +struct omimTitle *omimTitleLoad(char **row) +/* Load a omimTitle from row fetched with select * from omimTitle + * from database. Dispose of this with omimTitleFree(). */ +{ +struct omimTitle *ret; + +AllocVar(ret); +ret->omimId = sqlSigned(row[0]); +strcpy(ret->type, row[1]); +ret->geneSymbol = cloneString(row[2]); +ret->title = cloneString(row[3]); +return ret; +} + +struct omimTitle *omimTitleLoadAll(char *fileName) +/* Load all omimTitle from a whitespace-separated file. + * Dispose of this with omimTitleFreeList(). */ +{ +struct omimTitle *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[4]; + +while (lineFileRow(lf, row)) + { + el = omimTitleLoad(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct omimTitle *omimTitleLoadAllByChar(char *fileName, char chopper) +/* Load all omimTitle from a chopper separated file. + * Dispose of this with omimTitleFreeList(). */ +{ +struct omimTitle *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[4]; + +while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) + { + el = omimTitleLoad(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct omimTitle *omimTitleCommaIn(char **pS, struct omimTitle *ret) +/* Create a omimTitle out of a comma separated string. + * This will fill in ret if non-null, otherwise will + * return a new omimTitle */ +{ +char *s = *pS; + +if (ret == NULL) + AllocVar(ret); +ret->omimId = sqlSignedComma(&s); +sqlFixedStringComma(&s, ret->type, sizeof(ret->type)); +ret->geneSymbol = sqlStringComma(&s); +ret->title = sqlStringComma(&s); +*pS = s; +return ret; +} + +void omimTitleFree(struct omimTitle **pEl) +/* Free a single dynamically allocated omimTitle such as created + * with omimTitleLoad(). */ +{ +struct omimTitle *el; + +if ((el = *pEl) == NULL) return; +freeMem(el->geneSymbol); +freeMem(el->title); +freez(pEl); +} + +void omimTitleFreeList(struct omimTitle **pList) +/* Free a list of dynamically allocated omimTitle's */ +{ +struct omimTitle *el, *next; + +for (el = *pList; el != NULL; el = next) + { + next = el->next; + omimTitleFree(&el); + } +*pList = NULL; +} + +void omimTitleOutput(struct omimTitle *el, FILE *f, char sep, char lastSep) +/* Print out omimTitle. Separate fields with sep. Follow last field with lastSep. */ +{ +fprintf(f, "%d", el->omimId); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->type); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->geneSymbol); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->title); +if (sep == ',') fputc('"',f); +fputc(lastSep,f); +} + +/* -------------------------------- End autoSql Generated Code -------------------------------- */ +