533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/lib/barChartData.c src/hg/lib/barChartData.c deleted file mode 100644 index 17a4dc1..0000000 --- src/hg/lib/barChartData.c +++ /dev/null @@ -1,174 +0,0 @@ -/* barChartData.c was originally generated by the autoSql program, which also - * generated barChartData.h and barChartData.sql. This module links the database and - * the RAM representation of objects. */ - -#include "common.h" -#include "linefile.h" -#include "dystring.h" -#include "jksql.h" -#include "barChartData.h" - - - -char *barChartDataCommaSepFieldNames = "locus,sample,value"; - -void barChartDataStaticLoad(char **row, struct barChartData *ret) -/* Load a row from barChartData table into ret. The contents of ret will - * be replaced at the next call to this function. */ -{ - -ret->locus = row[0]; -ret->sample = row[1]; -ret->value = sqlDouble(row[2]); -} - -struct barChartData *barChartDataLoadByQuery(struct sqlConnection *conn, char *query) -/* Load all barChartData from table that satisfy the query given. - * Where query is of the form 'select * from example where something=something' - * or 'select example.* from example, anotherTable where example.something = - * anotherTable.something'. - * Dispose of this with barChartDataFreeList(). */ -{ -struct barChartData *list = NULL, *el; -struct sqlResult *sr; -char **row; - -sr = sqlGetResult(conn, query); -while ((row = sqlNextRow(sr)) != NULL) - { - el = barChartDataLoad(row); - slAddHead(&list, el); - } -slReverse(&list); -sqlFreeResult(&sr); -return list; -} - -void barChartDataSaveToDb(struct sqlConnection *conn, struct barChartData *el, char *tableName, int updateSize) -/* Save barChartData as a row to the table specified by tableName. - * As blob fields may be arbitrary size updateSize specifies the approx size - * of a string that would contain the entire query. Arrays of native types are - * converted to comma separated strings and loaded as such, User defined types are - * inserted as NULL. This function automatically escapes quoted strings for mysql. */ -{ -struct dyString *update = newDyString(updateSize); -sqlDyStringPrintf(update, "insert into %s values ( '%s','%s',%g)", - tableName, el->locus, el->sample, el->value); -sqlUpdate(conn, update->string); -freeDyString(&update); -} - -struct barChartData *barChartDataLoad(char **row) -/* Load a barChartData from row fetched with select * from barChartData - * from database. Dispose of this with barChartDataFree(). */ -{ -struct barChartData *ret; - -AllocVar(ret); -ret->locus = cloneString(row[0]); -ret->sample = cloneString(row[1]); -ret->value = sqlDouble(row[2]); -return ret; -} - -struct barChartData *barChartDataLoadAll(char *fileName) -/* Load all barChartData from a whitespace-separated file. - * Dispose of this with barChartDataFreeList(). */ -{ -struct barChartData *list = NULL, *el; -struct lineFile *lf = lineFileOpen(fileName, TRUE); -char *row[3]; - -while (lineFileRow(lf, row)) - { - el = barChartDataLoad(row); - slAddHead(&list, el); - } -lineFileClose(&lf); -slReverse(&list); -return list; -} - -struct barChartData *barChartDataLoadAllByChar(char *fileName, char chopper) -/* Load all barChartData from a chopper separated file. - * Dispose of this with barChartDataFreeList(). */ -{ -struct barChartData *list = NULL, *el; -struct lineFile *lf = lineFileOpen(fileName, TRUE); -char *row[3]; - -while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) - { - el = barChartDataLoad(row); - slAddHead(&list, el); - } -lineFileClose(&lf); -slReverse(&list); -return list; -} - -struct barChartData *barChartDataCommaIn(char **pS, struct barChartData *ret) -/* Create a barChartData out of a comma separated string. - * This will fill in ret if non-null, otherwise will - * return a new barChartData */ -{ -char *s = *pS; - -if (ret == NULL) - AllocVar(ret); -ret->locus = sqlStringComma(&s); -ret->sample = sqlStringComma(&s); -ret->value = sqlDoubleComma(&s); -*pS = s; -return ret; -} - -void barChartDataFree(struct barChartData **pEl) -/* Free a single dynamically allocated barChartData such as created - * with barChartDataLoad(). */ -{ -struct barChartData *el; - -if ((el = *pEl) == NULL) return; -freeMem(el->locus); -freeMem(el->sample); -freez(pEl); -} - -void barChartDataFreeList(struct barChartData **pList) -/* Free a list of dynamically allocated barChartData's */ -{ -struct barChartData *el, *next; - -for (el = *pList; el != NULL; el = next) - { - next = el->next; - barChartDataFree(&el); - } -*pList = NULL; -} - -void barChartDataOutput(struct barChartData *el, FILE *f, char sep, char lastSep) -/* Print out barChartData. Separate fields with sep. Follow last field with lastSep. */ -{ -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->locus); -if (sep == ',') fputc('"',f); -fputc(sep,f); -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->sample); -if (sep == ',') fputc('"',f); -fputc(sep,f); -fprintf(f, "%g", el->value); -fputc(lastSep,f); -} - -/* -------------------------------- End autoSql Generated Code -------------------------------- */ - -struct barChartData *barChartDataLoadForLocus(struct sqlConnection *conn, char *table, char *locus) -/* Load all data for a locus */ -{ -char query[512]; -sqlSafef(query, sizeof(query), "SELECT * FROM %s WHERE locus='%s'", table, locus); -return barChartDataLoadByQuery(conn, query); -}