533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/lib/gencodeTranscriptSupport.c src/hg/lib/gencodeTranscriptSupport.c deleted file mode 100644 index d3a6760..0000000 --- src/hg/lib/gencodeTranscriptSupport.c +++ /dev/null @@ -1,134 +0,0 @@ -/* gencodeTranscriptSupport.c was originally generated by the autoSql program, which also - * generated gencodeTranscriptSupport.h and gencodeTranscriptSupport.sql. This module links the database and - * the RAM representation of objects. */ - -#include "common.h" -#include "linefile.h" -#include "dystring.h" -#include "jksql.h" -#include "gencodeTranscriptSupport.h" - - - -char *gencodeTranscriptSupportCommaSepFieldNames = "transcriptId,seqId,seqSrc"; - -void gencodeTranscriptSupportStaticLoad(char **row, struct gencodeTranscriptSupport *ret) -/* Load a row from gencodeTranscriptSupport table into ret. The contents of ret will - * be replaced at the next call to this function. */ -{ - -ret->transcriptId = row[0]; -ret->seqId = row[1]; -ret->seqSrc = row[2]; -} - -struct gencodeTranscriptSupport *gencodeTranscriptSupportLoad(char **row) -/* Load a gencodeTranscriptSupport from row fetched with select * from gencodeTranscriptSupport - * from database. Dispose of this with gencodeTranscriptSupportFree(). */ -{ -struct gencodeTranscriptSupport *ret; - -AllocVar(ret); -ret->transcriptId = cloneString(row[0]); -ret->seqId = cloneString(row[1]); -ret->seqSrc = cloneString(row[2]); -return ret; -} - -struct gencodeTranscriptSupport *gencodeTranscriptSupportLoadAll(char *fileName) -/* Load all gencodeTranscriptSupport from a whitespace-separated file. - * Dispose of this with gencodeTranscriptSupportFreeList(). */ -{ -struct gencodeTranscriptSupport *list = NULL, *el; -struct lineFile *lf = lineFileOpen(fileName, TRUE); -char *row[3]; - -while (lineFileRow(lf, row)) - { - el = gencodeTranscriptSupportLoad(row); - slAddHead(&list, el); - } -lineFileClose(&lf); -slReverse(&list); -return list; -} - -struct gencodeTranscriptSupport *gencodeTranscriptSupportLoadAllByChar(char *fileName, char chopper) -/* Load all gencodeTranscriptSupport from a chopper separated file. - * Dispose of this with gencodeTranscriptSupportFreeList(). */ -{ -struct gencodeTranscriptSupport *list = NULL, *el; -struct lineFile *lf = lineFileOpen(fileName, TRUE); -char *row[3]; - -while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) - { - el = gencodeTranscriptSupportLoad(row); - slAddHead(&list, el); - } -lineFileClose(&lf); -slReverse(&list); -return list; -} - -struct gencodeTranscriptSupport *gencodeTranscriptSupportCommaIn(char **pS, struct gencodeTranscriptSupport *ret) -/* Create a gencodeTranscriptSupport out of a comma separated string. - * This will fill in ret if non-null, otherwise will - * return a new gencodeTranscriptSupport */ -{ -char *s = *pS; - -if (ret == NULL) - AllocVar(ret); -ret->transcriptId = sqlStringComma(&s); -ret->seqId = sqlStringComma(&s); -ret->seqSrc = sqlStringComma(&s); -*pS = s; -return ret; -} - -void gencodeTranscriptSupportFree(struct gencodeTranscriptSupport **pEl) -/* Free a single dynamically allocated gencodeTranscriptSupport such as created - * with gencodeTranscriptSupportLoad(). */ -{ -struct gencodeTranscriptSupport *el; - -if ((el = *pEl) == NULL) return; -freeMem(el->transcriptId); -freeMem(el->seqId); -freeMem(el->seqSrc); -freez(pEl); -} - -void gencodeTranscriptSupportFreeList(struct gencodeTranscriptSupport **pList) -/* Free a list of dynamically allocated gencodeTranscriptSupport's */ -{ -struct gencodeTranscriptSupport *el, *next; - -for (el = *pList; el != NULL; el = next) - { - next = el->next; - gencodeTranscriptSupportFree(&el); - } -*pList = NULL; -} - -void gencodeTranscriptSupportOutput(struct gencodeTranscriptSupport *el, FILE *f, char sep, char lastSep) -/* Print out gencodeTranscriptSupport. Separate fields with sep. Follow last field with lastSep. */ -{ -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->transcriptId); -if (sep == ',') fputc('"',f); -fputc(sep,f); -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->seqId); -if (sep == ',') fputc('"',f); -fputc(sep,f); -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->seqSrc); -if (sep == ',') fputc('"',f); -fputc(lastSep,f); -} - -/* -------------------------------- End autoSql Generated Code -------------------------------- */ -