533112afe2a2005e80cdb1f82904ea65032d4302
braney
  Sat Oct 2 11:37:34 2021 -0700
split hg/lib into two separate libaries, one only used by the cgis

diff --git src/hg/lib/ld2.c src/hg/lib/ld2.c
deleted file mode 100644
index 3834262..0000000
--- src/hg/lib/ld2.c
+++ /dev/null
@@ -1,193 +0,0 @@
-/* ld2.c was originally generated by the autoSql program, which also 
- * generated ld2.h and ld2.sql.  This module links the database and
- * the RAM representation of objects. */
-
-/* Copyright (C) 2014 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
-
-#include "common.h"
-#include "linefile.h"
-#include "dystring.h"
-#include "jksql.h"
-#include "ld2.h"
-
-
-void ld2StaticLoad(char **row, struct ld2 *ret)
-/* Load a row from ld2 table into ret.  The contents of ret will
- * be replaced at the next call to this function. */
-{
-
-ret->chrom = row[0];
-ret->chromStart = sqlUnsigned(row[1]);
-ret->chromEnd = sqlUnsigned(row[2]);
-ret->name = row[3];
-ret->ldCount = sqlUnsigned(row[4]);
-ret->dprime = row[5];
-ret->rsquared = row[6];
-ret->lod = row[7];
-ret->avgDprime = row[8][0];
-ret->avgRsquared = row[9][0];
-ret->avgLod = row[10][0];
-ret->tInt = row[11][0];
-}
-
-struct ld2 *ld2Load(char **row)
-/* Load a ld2 from row fetched with select * from ld2
- * from database.  Dispose of this with ld2Free(). */
-{
-struct ld2 *ret;
-
-AllocVar(ret);
-ret->chrom = cloneString(row[0]);
-ret->chromStart = sqlUnsigned(row[1]);
-ret->chromEnd = sqlUnsigned(row[2]);
-ret->name = cloneString(row[3]);
-ret->ldCount = sqlUnsigned(row[4]);
-ret->dprime = cloneString(row[5]);
-ret->rsquared = cloneString(row[6]);
-ret->lod = cloneString(row[7]);
-ret->avgDprime = row[8][0];
-ret->avgRsquared = row[9][0];
-ret->avgLod = row[10][0];
-ret->tInt = row[11][0];
-return ret;
-}
-
-struct ld2 *ld2LoadAll(char *fileName) 
-/* Load all ld2 from a whitespace-separated file.
- * Dispose of this with ld2FreeList(). */
-{
-struct ld2 *list = NULL, *el;
-struct lineFile *lf = lineFileOpen(fileName, TRUE);
-char *row[12];
-
-while (lineFileRow(lf, row))
-    {
-    el = ld2Load(row);
-    slAddHead(&list, el);
-    }
-lineFileClose(&lf);
-slReverse(&list);
-return list;
-}
-
-struct ld2 *ld2LoadAllByChar(char *fileName, char chopper) 
-/* Load all ld2 from a chopper separated file.
- * Dispose of this with ld2FreeList(). */
-{
-struct ld2 *list = NULL, *el;
-struct lineFile *lf = lineFileOpen(fileName, TRUE);
-char *row[12];
-
-while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
-    {
-    el = ld2Load(row);
-    slAddHead(&list, el);
-    }
-lineFileClose(&lf);
-slReverse(&list);
-return list;
-}
-
-struct ld2 *ld2CommaIn(char **pS, struct ld2 *ret)
-/* Create a ld2 out of a comma separated string. 
- * This will fill in ret if non-null, otherwise will
- * return a new ld2 */
-{
-char *s = *pS;
-
-if (ret == NULL)
-    AllocVar(ret);
-ret->chrom = sqlStringComma(&s);
-ret->chromStart = sqlUnsignedComma(&s);
-ret->chromEnd = sqlUnsignedComma(&s);
-ret->name = sqlStringComma(&s);
-ret->ldCount = sqlUnsignedComma(&s);
-ret->dprime = sqlStringComma(&s);
-ret->rsquared = sqlStringComma(&s);
-ret->lod = sqlStringComma(&s);
-sqlFixedStringComma(&s, &(ret->avgDprime), sizeof(ret->avgDprime));
-sqlFixedStringComma(&s, &(ret->avgRsquared), sizeof(ret->avgRsquared));
-sqlFixedStringComma(&s, &(ret->avgLod), sizeof(ret->avgLod));
-sqlFixedStringComma(&s, &(ret->tInt), sizeof(ret->tInt));
-*pS = s;
-return ret;
-}
-
-void ld2Free(struct ld2 **pEl)
-/* Free a single dynamically allocated ld2 such as created
- * with ld2Load(). */
-{
-struct ld2 *el;
-
-if ((el = *pEl) == NULL) return;
-freeMem(el->chrom);
-freeMem(el->name);
-freeMem(el->dprime);
-freeMem(el->rsquared);
-freeMem(el->lod);
-freez(pEl);
-}
-
-void ld2FreeList(struct ld2 **pList)
-/* Free a list of dynamically allocated ld2's */
-{
-struct ld2 *el, *next;
-
-for (el = *pList; el != NULL; el = next)
-    {
-    next = el->next;
-    ld2Free(&el);
-    }
-*pList = NULL;
-}
-
-void ld2Output(struct ld2 *el, FILE *f, char sep, char lastSep) 
-/* Print out ld2.  Separate fields with sep. Follow last field with lastSep. */
-{
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->chrom);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-fprintf(f, "%u", el->chromStart);
-fputc(sep,f);
-fprintf(f, "%u", el->chromEnd);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->name);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-fprintf(f, "%u", el->ldCount);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->dprime);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->rsquared);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->lod);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%c", el->avgDprime);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%c", el->avgRsquared);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%c", el->avgLod);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%c", el->tInt);
-if (sep == ',') fputc('"',f);
-fputc(lastSep,f);
-}
-
-/* -------------------------------- End autoSql Generated Code -------------------------------- */
-