533112afe2a2005e80cdb1f82904ea65032d4302
braney
  Sat Oct 2 11:37:34 2021 -0700
split hg/lib into two separate libaries, one only used by the cgis

diff --git src/hg/lib/rnaFold.c src/hg/lib/rnaFold.c
deleted file mode 100644
index eb6229d..0000000
--- src/hg/lib/rnaFold.c
+++ /dev/null
@@ -1,139 +0,0 @@
-/* rnaFold.c was originally generated by the autoSql program, which also 
- * generated rnaFold.h and rnaFold.sql.  This module links the database and
- * the RAM representation of objects. */
-
-/* Copyright (C) 2014 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
-
-#include "common.h"
-#include "linefile.h"
-#include "dystring.h"
-#include "jksql.h"
-#include "rnaFold.h"
-
-
-void rnaFoldStaticLoad(char **row, struct rnaFold *ret)
-/* Load a row from rnaFold table into ret.  The contents of ret will
- * be replaced at the next call to this function. */
-{
-
-ret->name = row[0];
-ret->seq = row[1];
-ret->fold = row[2];
-ret->energy = atof(row[3]);
-}
-
-struct rnaFold *rnaFoldLoad(char **row)
-/* Load a rnaFold from row fetched with select * from rnaFold
- * from database.  Dispose of this with rnaFoldFree(). */
-{
-struct rnaFold *ret;
-
-AllocVar(ret);
-ret->name = cloneString(row[0]);
-ret->seq = cloneString(row[1]);
-ret->fold = cloneString(row[2]);
-ret->energy = atof(row[3]);
-return ret;
-}
-
-struct rnaFold *rnaFoldLoadAll(char *fileName) 
-/* Load all rnaFold from a whitespace-separated file.
- * Dispose of this with rnaFoldFreeList(). */
-{
-struct rnaFold *list = NULL, *el;
-struct lineFile *lf = lineFileOpen(fileName, TRUE);
-char *row[4];
-
-while (lineFileRow(lf, row))
-    {
-    el = rnaFoldLoad(row);
-    slAddHead(&list, el);
-    }
-lineFileClose(&lf);
-slReverse(&list);
-return list;
-}
-
-struct rnaFold *rnaFoldLoadAllByChar(char *fileName, char chopper) 
-/* Load all rnaFold from a chopper separated file.
- * Dispose of this with rnaFoldFreeList(). */
-{
-struct rnaFold *list = NULL, *el;
-struct lineFile *lf = lineFileOpen(fileName, TRUE);
-char *row[4];
-
-while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
-    {
-    el = rnaFoldLoad(row);
-    slAddHead(&list, el);
-    }
-lineFileClose(&lf);
-slReverse(&list);
-return list;
-}
-
-struct rnaFold *rnaFoldCommaIn(char **pS, struct rnaFold *ret)
-/* Create a rnaFold out of a comma separated string. 
- * This will fill in ret if non-null, otherwise will
- * return a new rnaFold */
-{
-char *s = *pS;
-
-if (ret == NULL)
-    AllocVar(ret);
-ret->name = sqlStringComma(&s);
-ret->seq = sqlStringComma(&s);
-ret->fold = sqlStringComma(&s);
-ret->energy = sqlFloatComma(&s);
-*pS = s;
-return ret;
-}
-
-void rnaFoldFree(struct rnaFold **pEl)
-/* Free a single dynamically allocated rnaFold such as created
- * with rnaFoldLoad(). */
-{
-struct rnaFold *el;
-
-if ((el = *pEl) == NULL) return;
-freeMem(el->name);
-freeMem(el->seq);
-freeMem(el->fold);
-freez(pEl);
-}
-
-void rnaFoldFreeList(struct rnaFold **pList)
-/* Free a list of dynamically allocated rnaFold's */
-{
-struct rnaFold *el, *next;
-
-for (el = *pList; el != NULL; el = next)
-    {
-    next = el->next;
-    rnaFoldFree(&el);
-    }
-*pList = NULL;
-}
-
-void rnaFoldOutput(struct rnaFold *el, FILE *f, char sep, char lastSep) 
-/* Print out rnaFold.  Separate fields with sep. Follow last field with lastSep. */
-{
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->name);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->seq);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->fold);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-fprintf(f, "%f", el->energy);
-fputc(lastSep,f);
-}
-
-/* -------------------------------- End autoSql Generated Code -------------------------------- */
-