533112afe2a2005e80cdb1f82904ea65032d4302
braney
  Sat Oct 2 11:37:34 2021 -0700
split hg/lib into two separate libaries, one only used by the cgis

diff --git src/hg/lib/tests/annoGratorTests.mk src/hg/lib/tests/annoGratorTests.mk
deleted file mode 100644
index 23f82f0..0000000
--- src/hg/lib/tests/annoGratorTests.mk
+++ /dev/null
@@ -1,73 +0,0 @@
-# makefile with annoGrator tests
-include ../../../inc/common.mk
-
-BIN_DIR = bin/$(MACHTYPE)
-TESTER = ${BIN_DIR}/annoGratorTester
-IN_DIR = input/annoGrator
-EXP_DIR = expected/annoGrator
-OUT_DIR = output/annoGrator
-DB=hg19
-
-test: pgSnpDbToTabOut pgSnpKgDbToTabOutShort pgSnpKgDbToGpFx snpConsDbToTabOutShort vcfEx1 vcfEx2 \
-      bigBedToTabOut snpBigWigToTabOut vepOut vepOutIndelTrim gpFx insertions
-
-pgSnpDbToTabOut: mkout
-	${TESTER} ${DB} $@ > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-pgSnpKgDbToTabOutShort: mkout
-	${TESTER} ${DB} $@ > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-pgSnpKgDbToGpFx: mkout
-	${TESTER} ${DB} $@ > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-snpConsDbToTabOutShort: mkout
-	${TESTER} ${DB} $@ > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-vcfEx1: mkout
-	${TESTER} ${DB} $@ > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-vcfEx2: mkout
-	${TESTER} ${DB} $@ > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-bigBedToTabOut: mkout
-	${TESTER} ${DB} $@ > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-snpBigWigToTabOut: mkout
-	${TESTER} ${DB} $@ > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-vepOut: mkout
-	${TESTER} ${DB} $@ | grep -v 'Output produced at' > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-vepOutIndelTrim: mkout
-	${TESTER} ${DB} $@ | grep -v 'Output produced at' > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-gpFx: mkout
-	${TESTER} ${DB} $@ | grep -v 'Output produced at' > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-
-insertions: mkout
-	hgsql test -e 'drop table if exists chromInfo; \
-	               create table chromInfo select * from hg19.chromInfo;'
-	hgLoadBed -verbose=0 -allowStartEqualEnd \
-                  test insertionsPrimary input/annoGrator/insertionsPrimary.bed
-	hgLoadBed -verbose=0 -allowStartEqualEnd \
-                  test insertionsSecondary input/annoGrator/insertionsSecondary.bed
-	${TESTER} ${DB} $@ > ${OUT_DIR}/$@.txt
-	diff -u ${EXP_DIR}/$@.txt ${OUT_DIR}/$@.txt
-	hgsql test -e 'drop table chromInfo; \
-                       drop table insertionsPrimary; \
-                       drop table insertionsSecondary;'
-	rm -f bed.tab
-
-mkout:
-	@${MKDIR} ${OUT_DIR}