b30a73b6c5f4aaf404e7b670c0142178b64b6424 braney Mon Sep 27 17:37:11 2021 -0700 temporarily remove hg/lib/tests annogratorTest while we consider whether we're upgrading hg19 knownGene diff --git src/hg/lib/tests/makefile src/hg/lib/tests/makefile index 2b1b5ab..5edd60d 100644 --- src/hg/lib/tests/makefile +++ src/hg/lib/tests/makefile @@ -1,61 +1,62 @@ kentSrc = ../../.. include ../../../inc/common.mk L += ${MYSQLLIBS} -lm MYLIBDIR = ../../../lib/${MACHTYPE} MYLIBS = ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a BIN_DIR = bin/${MACHTYPE} all: ${BIN_DIR}/genePredTester \ ${BIN_DIR}/pslReaderTester \ - ${BIN_DIR}/annoGratorTester \ +# ${BIN_DIR}/annoGratorTester \ ${BIN_DIR}/binTest \ ${BIN_DIR}/customTrackTester \ ${BIN_DIR}/hgvsTester \ ${BIN_DIR}/sqlCheck -test: binTest spDbTest hdbTest genePredTest pslReaderTest annoGratorTest customTrackTest hgvsTest +#test: binTest spDbTest hdbTest genePredTest pslReaderTest annoGratorTest customTrackTest hgvsTest +test: binTest spDbTest hdbTest genePredTest pslReaderTest customTrackTest hgvsTest rm -r output echo tested all mkdirs: @${MKDIR} output ${BIN_DIR} loaders: rm -f loader ln -s ${CGI_BIN}/loader . spDbTest: spDbTest.o ${MYLIBS} mkdirs ${CC} ${COPT} -o ${BIN_DIR}/spDbTest spDbTest.o ${MYLIBS} $L ${BIN_DIR}/spDbTest sp121210 Q9FFH7 > output/spDbTest ${BIN_DIR}/spDbTest sp121210 P29312 >> output/spDbTest diff expected/spDbTest output/spDbTest hdbTest: hdbTest.o ${MYLIBS} mkdirs ${CC} ${COPT} -o ${BIN_DIR}/hdbTest hdbTest.o ${MYLIBS} $L ${BIN_DIR}/hdbTest > output/hdbTest diff expected/hdbTest output/hdbTest genePredTest: ${BIN_DIR}/genePredTester mkdirs ${MAKE} -f genePredTests.mk test pslReaderTest: ${BIN_DIR}/pslReaderTester mkdirs ${MAKE} -f pslReaderTests.mk test -annoGratorTest: ${BIN_DIR}/annoGratorTester mkdirs - ${MAKE} -f annoGratorTests.mk test +#annoGratorTest: ${BIN_DIR}/annoGratorTester mkdirs +# ${MAKE} -f annoGratorTests.mk test customTrackTest: ${BIN_DIR}/customTrackTester loaders mkdirs ${MAKE} -f customTrackTests.mk test BIN_DIR=${BIN_DIR} OUT_DIR=output rm -f loader hgvsTest: ${BIN_DIR}/hgvsTester mkdirs ${MAKE} -f hgvsTests.mk test binTest: mkdirs ${BIN_DIR}/binTest @./binTest.sh sqlCheck: ${BIN_DIR}/sqlCheck mkdirs ${MAKE} -f sqlCheck.mk test BIN_DIR=${BIN_DIR} OUT_DIR=output