533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/cgilib/HInv.c src/hg/cgilib/HInv.c new file mode 100644 index 0000000..e89af88 --- /dev/null +++ src/hg/cgilib/HInv.c @@ -0,0 +1,134 @@ +/* HInv.c was originally generated by the autoSql program, which also + * generated HInv.h and HInv.sql. This module links the database and + * the RAM representation of objects. */ + +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + +#include "common.h" +#include "linefile.h" +#include "dystring.h" +#include "jksql.h" +#include "HInv.h" + + +void HInvStaticLoad(char **row, struct HInv *ret) +/* Load a row from HInv table into ret. The contents of ret will + * be replaced at the next call to this function. */ +{ + +ret->geneId = row[0]; +ret->clusterId = row[1]; +ret->mrnaAcc = row[2]; +} + +struct HInv *HInvLoad(char **row) +/* Load a HInv from row fetched with select * from HInv + * from database. Dispose of this with HInvFree(). */ +{ +struct HInv *ret; + +AllocVar(ret); +ret->geneId = cloneString(row[0]); +ret->clusterId = cloneString(row[1]); +ret->mrnaAcc = cloneString(row[2]); +return ret; +} + +struct HInv *HInvLoadAll(char *fileName) +/* Load all HInv from a whitespace-separated file. + * Dispose of this with HInvFreeList(). */ +{ +struct HInv *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[3]; + +while (lineFileRow(lf, row)) + { + el = HInvLoad(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct HInv *HInvLoadAllByChar(char *fileName, char chopper) +/* Load all HInv from a chopper separated file. + * Dispose of this with HInvFreeList(). */ +{ +struct HInv *list = NULL, *el; +struct lineFile *lf = lineFileOpen(fileName, TRUE); +char *row[3]; + +while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) + { + el = HInvLoad(row); + slAddHead(&list, el); + } +lineFileClose(&lf); +slReverse(&list); +return list; +} + +struct HInv *HInvCommaIn(char **pS, struct HInv *ret) +/* Create a HInv out of a comma separated string. + * This will fill in ret if non-null, otherwise will + * return a new HInv */ +{ +char *s = *pS; + +if (ret == NULL) + AllocVar(ret); +ret->geneId = sqlStringComma(&s); +ret->clusterId = sqlStringComma(&s); +ret->mrnaAcc = sqlStringComma(&s); +*pS = s; +return ret; +} + +void HInvFree(struct HInv **pEl) +/* Free a single dynamically allocated HInv such as created + * with HInvLoad(). */ +{ +struct HInv *el; + +if ((el = *pEl) == NULL) return; +freeMem(el->geneId); +freeMem(el->clusterId); +freeMem(el->mrnaAcc); +freez(pEl); +} + +void HInvFreeList(struct HInv **pList) +/* Free a list of dynamically allocated HInv's */ +{ +struct HInv *el, *next; + +for (el = *pList; el != NULL; el = next) + { + next = el->next; + HInvFree(&el); + } +*pList = NULL; +} + +void HInvOutput(struct HInv *el, FILE *f, char sep, char lastSep) +/* Print out HInv. Separate fields with sep. Follow last field with lastSep. */ +{ +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->geneId); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->clusterId); +if (sep == ',') fputc('"',f); +fputc(sep,f); +if (sep == ',') fputc('"',f); +fprintf(f, "%s", el->mrnaAcc); +if (sep == ',') fputc('"',f); +fputc(lastSep,f); +} + +/* -------------------------------- End autoSql Generated Code -------------------------------- */ +