533112afe2a2005e80cdb1f82904ea65032d4302
braney
  Sat Oct 2 11:37:34 2021 -0700
split hg/lib into two separate libaries, one only used by the cgis

diff --git src/hg/cgilib/gbMiscDiff.c src/hg/cgilib/gbMiscDiff.c
new file mode 100644
index 0000000..d343a1c
--- /dev/null
+++ src/hg/cgilib/gbMiscDiff.c
@@ -0,0 +1,151 @@
+/* gbMiscDiff.c was originally generated by the autoSql program, which also 
+ * generated gbMiscDiff.h and gbMiscDiff.sql.  This module links the database and
+ * the RAM representation of objects. */
+
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
+#include "common.h"
+#include "linefile.h"
+#include "dystring.h"
+#include "jksql.h"
+#include "gbMiscDiff.h"
+
+
+void gbMiscDiffStaticLoad(char **row, struct gbMiscDiff *ret)
+/* Load a row from gbMiscDiff table into ret.  The contents of ret will
+ * be replaced at the next call to this function. */
+{
+
+strcpy(ret->acc, row[0]);
+ret->mrnaStart = sqlSigned(row[1]);
+ret->mrnaEnd = sqlSigned(row[2]);
+ret->notes = row[3];
+ret->gene = row[4];
+ret->replacement = row[5];
+}
+
+struct gbMiscDiff *gbMiscDiffLoad(char **row)
+/* Load a gbMiscDiff from row fetched with select * from gbMiscDiff
+ * from database.  Dispose of this with gbMiscDiffFree(). */
+{
+struct gbMiscDiff *ret;
+
+AllocVar(ret);
+strcpy(ret->acc, row[0]);
+ret->mrnaStart = sqlSigned(row[1]);
+ret->mrnaEnd = sqlSigned(row[2]);
+ret->notes = cloneString(row[3]);
+ret->gene = cloneString(row[4]);
+ret->replacement = cloneString(row[5]);
+return ret;
+}
+
+struct gbMiscDiff *gbMiscDiffLoadAll(char *fileName) 
+/* Load all gbMiscDiff from a whitespace-separated file.
+ * Dispose of this with gbMiscDiffFreeList(). */
+{
+struct gbMiscDiff *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[6];
+
+while (lineFileRow(lf, row))
+    {
+    el = gbMiscDiffLoad(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct gbMiscDiff *gbMiscDiffLoadAllByChar(char *fileName, char chopper) 
+/* Load all gbMiscDiff from a chopper separated file.
+ * Dispose of this with gbMiscDiffFreeList(). */
+{
+struct gbMiscDiff *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[6];
+
+while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
+    {
+    el = gbMiscDiffLoad(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct gbMiscDiff *gbMiscDiffCommaIn(char **pS, struct gbMiscDiff *ret)
+/* Create a gbMiscDiff out of a comma separated string. 
+ * This will fill in ret if non-null, otherwise will
+ * return a new gbMiscDiff */
+{
+char *s = *pS;
+
+if (ret == NULL)
+    AllocVar(ret);
+sqlFixedStringComma(&s, ret->acc, sizeof(ret->acc));
+ret->mrnaStart = sqlSignedComma(&s);
+ret->mrnaEnd = sqlSignedComma(&s);
+ret->notes = sqlStringComma(&s);
+ret->gene = sqlStringComma(&s);
+ret->replacement = sqlStringComma(&s);
+*pS = s;
+return ret;
+}
+
+void gbMiscDiffFree(struct gbMiscDiff **pEl)
+/* Free a single dynamically allocated gbMiscDiff such as created
+ * with gbMiscDiffLoad(). */
+{
+struct gbMiscDiff *el;
+
+if ((el = *pEl) == NULL) return;
+freeMem(el->notes);
+freeMem(el->gene);
+freeMem(el->replacement);
+freez(pEl);
+}
+
+void gbMiscDiffFreeList(struct gbMiscDiff **pList)
+/* Free a list of dynamically allocated gbMiscDiff's */
+{
+struct gbMiscDiff *el, *next;
+
+for (el = *pList; el != NULL; el = next)
+    {
+    next = el->next;
+    gbMiscDiffFree(&el);
+    }
+*pList = NULL;
+}
+
+void gbMiscDiffOutput(struct gbMiscDiff *el, FILE *f, char sep, char lastSep) 
+/* Print out gbMiscDiff.  Separate fields with sep. Follow last field with lastSep. */
+{
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->acc);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%d", el->mrnaStart);
+fputc(sep,f);
+fprintf(f, "%d", el->mrnaEnd);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->notes);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->gene);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->replacement);
+if (sep == ',') fputc('"',f);
+fputc(lastSep,f);
+}
+
+/* -------------------------------- End autoSql Generated Code -------------------------------- */
+