533112afe2a2005e80cdb1f82904ea65032d4302
braney
  Sat Oct 2 11:37:34 2021 -0700
split hg/lib into two separate libaries, one only used by the cgis

diff --git src/hg/cgilib/isochores.c src/hg/cgilib/isochores.c
new file mode 100644
index 0000000..a9c3b3c
--- /dev/null
+++ src/hg/cgilib/isochores.c
@@ -0,0 +1,101 @@
+/* isochores.c was originally generated by the autoSql program, which also 
+ * generated isochores.h and isochores.sql.  This module links the database and the RAM 
+ * representation of objects. */
+
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
+#include "common.h"
+#include "jksql.h"
+#include "isochores.h"
+
+
+void isochoresStaticLoad(char **row, struct isochores *ret)
+/* Load a row from isochores table into ret.  The contents of ret will
+ * be replaced at the next call to this function. */
+{
+
+ret->chrom = row[0];
+ret->chromStart = sqlUnsigned(row[1]);
+ret->chromEnd = sqlUnsigned(row[2]);
+ret->name = row[3];
+ret->gcPpt = sqlUnsigned(row[4]);
+}
+
+struct isochores *isochoresLoad(char **row)
+/* Load a isochores from row fetched with select * from isochores
+ * from database.  Dispose of this with isochoresFree(). */
+{
+struct isochores *ret;
+
+AllocVar(ret);
+ret->chrom = cloneString(row[0]);
+ret->chromStart = sqlUnsigned(row[1]);
+ret->chromEnd = sqlUnsigned(row[2]);
+ret->name = cloneString(row[3]);
+ret->gcPpt = sqlUnsigned(row[4]);
+return ret;
+}
+
+struct isochores *isochoresCommaIn(char **pS, struct isochores *ret)
+/* Create a isochores out of a comma separated string. 
+ * This will fill in ret if non-null, otherwise will
+ * return a new isochores */
+{
+char *s = *pS;
+
+if (ret == NULL)
+    AllocVar(ret);
+ret->chrom = sqlStringComma(&s);
+ret->chromStart = sqlUnsignedComma(&s);
+ret->chromEnd = sqlUnsignedComma(&s);
+ret->name = sqlStringComma(&s);
+ret->gcPpt = sqlUnsignedComma(&s);
+*pS = s;
+return ret;
+}
+
+void isochoresFree(struct isochores **pEl)
+/* Free a single dynamically allocated isochores such as created
+ * with isochoresLoad(). */
+{
+struct isochores *el;
+
+if ((el = *pEl) == NULL) return;
+freeMem(el->chrom);
+freeMem(el->name);
+freez(pEl);
+}
+
+void isochoresFreeList(struct isochores **pList)
+/* Free a list of dynamically allocated isochores's */
+{
+struct isochores *el, *next;
+
+for (el = *pList; el != NULL; el = next)
+    {
+    next = el->next;
+    isochoresFree(&el);
+    }
+*pList = NULL;
+}
+
+void isochoresOutput(struct isochores *el, FILE *f, char sep, char lastSep) 
+/* Print out isochores.  Separate fields with sep. Follow last field with lastSep. */
+{
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->chrom);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%u", el->chromStart);
+fputc(sep,f);
+fprintf(f, "%u", el->chromEnd);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->name);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%u", el->gcPpt);
+fputc(lastSep,f);
+}
+