533112afe2a2005e80cdb1f82904ea65032d4302
braney
  Sat Oct 2 11:37:34 2021 -0700
split hg/lib into two separate libaries, one only used by the cgis

diff --git src/hg/cgilib/kg1ToKg2.c src/hg/cgilib/kg1ToKg2.c
new file mode 100644
index 0000000..d712373
--- /dev/null
+++ src/hg/cgilib/kg1ToKg2.c
@@ -0,0 +1,160 @@
+/* kg1ToKg2.c was originally generated by the autoSql program, which also 
+ * generated kg1ToKg2.h and kg1ToKg2.sql.  This module links the database and
+ * the RAM representation of objects. */
+
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
+#include "common.h"
+#include "linefile.h"
+#include "dystring.h"
+#include "jksql.h"
+#include "kg1ToKg2.h"
+
+
+void kg1ToKg2StaticLoad(char **row, struct kg1ToKg2 *ret)
+/* Load a row from kg1ToKg2 table into ret.  The contents of ret will
+ * be replaced at the next call to this function. */
+{
+
+ret->oldId = row[0];
+ret->oldChrom = row[1];
+ret->oldStart = sqlSigned(row[2]);
+ret->oldEnd = sqlSigned(row[3]);
+ret->newId = row[4];
+ret->status = row[5];
+ret->note = row[6];
+}
+
+struct kg1ToKg2 *kg1ToKg2Load(char **row)
+/* Load a kg1ToKg2 from row fetched with select * from kg1ToKg2
+ * from database.  Dispose of this with kg1ToKg2Free(). */
+{
+struct kg1ToKg2 *ret;
+
+AllocVar(ret);
+ret->oldId = cloneString(row[0]);
+ret->oldChrom = cloneString(row[1]);
+ret->oldStart = sqlSigned(row[2]);
+ret->oldEnd = sqlSigned(row[3]);
+ret->newId = cloneString(row[4]);
+ret->status = cloneString(row[5]);
+ret->note = cloneString(row[6]);
+return ret;
+}
+
+struct kg1ToKg2 *kg1ToKg2LoadAll(char *fileName) 
+/* Load all kg1ToKg2 from a whitespace-separated file.
+ * Dispose of this with kg1ToKg2FreeList(). */
+{
+struct kg1ToKg2 *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[7];
+
+while (lineFileRow(lf, row))
+    {
+    el = kg1ToKg2Load(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct kg1ToKg2 *kg1ToKg2LoadAllByChar(char *fileName, char chopper) 
+/* Load all kg1ToKg2 from a chopper separated file.
+ * Dispose of this with kg1ToKg2FreeList(). */
+{
+struct kg1ToKg2 *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[7];
+
+while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
+    {
+    el = kg1ToKg2Load(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct kg1ToKg2 *kg1ToKg2CommaIn(char **pS, struct kg1ToKg2 *ret)
+/* Create a kg1ToKg2 out of a comma separated string. 
+ * This will fill in ret if non-null, otherwise will
+ * return a new kg1ToKg2 */
+{
+char *s = *pS;
+
+if (ret == NULL)
+    AllocVar(ret);
+ret->oldId = sqlStringComma(&s);
+ret->oldChrom = sqlStringComma(&s);
+ret->oldStart = sqlSignedComma(&s);
+ret->oldEnd = sqlSignedComma(&s);
+ret->newId = sqlStringComma(&s);
+ret->status = sqlStringComma(&s);
+ret->note = sqlStringComma(&s);
+*pS = s;
+return ret;
+}
+
+void kg1ToKg2Free(struct kg1ToKg2 **pEl)
+/* Free a single dynamically allocated kg1ToKg2 such as created
+ * with kg1ToKg2Load(). */
+{
+struct kg1ToKg2 *el;
+
+if ((el = *pEl) == NULL) return;
+freeMem(el->oldId);
+freeMem(el->oldChrom);
+freeMem(el->newId);
+freeMem(el->status);
+freeMem(el->note);
+freez(pEl);
+}
+
+void kg1ToKg2FreeList(struct kg1ToKg2 **pList)
+/* Free a list of dynamically allocated kg1ToKg2's */
+{
+struct kg1ToKg2 *el, *next;
+
+for (el = *pList; el != NULL; el = next)
+    {
+    next = el->next;
+    kg1ToKg2Free(&el);
+    }
+*pList = NULL;
+}
+
+void kg1ToKg2Output(struct kg1ToKg2 *el, FILE *f, char sep, char lastSep) 
+/* Print out kg1ToKg2.  Separate fields with sep. Follow last field with lastSep. */
+{
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->oldId);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->oldChrom);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%d", el->oldStart);
+fputc(sep,f);
+fprintf(f, "%d", el->oldEnd);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->newId);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->status);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->note);
+if (sep == ',') fputc('"',f);
+fputc(lastSep,f);
+}
+
+/* -------------------------------- End autoSql Generated Code -------------------------------- */
+