533112afe2a2005e80cdb1f82904ea65032d4302
braney
  Sat Oct 2 11:37:34 2021 -0700
split hg/lib into two separate libaries, one only used by the cgis

diff --git src/hg/cgilib/stsInfoMouseNew.c src/hg/cgilib/stsInfoMouseNew.c
new file mode 100644
index 0000000..5ee2f21
--- /dev/null
+++ src/hg/cgilib/stsInfoMouseNew.c
@@ -0,0 +1,283 @@
+/* stsInfoMouseNew.c was originally generated by the autoSql program, which also 
+ * generated stsInfoMouseNew.h and stsInfoMouseNew.sql.  This module links the database and
+ * the RAM representation of objects. */
+
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
+#include "common.h"
+#include "linefile.h"
+#include "dystring.h"
+#include "jksql.h"
+#include "stsInfoMouseNew.h"
+
+
+void stsInfoMouseNewStaticLoad(char **row, struct stsInfoMouseNew *ret)
+/* Load a row from stsInfoMouseNew table into ret.  The contents of ret will
+ * be replaced at the next call to this function. */
+{
+
+ret->identNo = sqlUnsigned(row[0]);
+ret->name = row[1];
+ret->MGIId = sqlUnsigned(row[2]);
+ret->MGIName = row[3];
+ret->UiStsId = sqlUnsigned(row[4]);
+ret->nameCount = sqlUnsigned(row[5]);
+ret->alias = row[6];
+ret->primer1 = row[7];
+ret->primer2 = row[8];
+ret->distance = row[9];
+ret->sequence = sqlUnsigned(row[10]);
+ret->organis = row[11];
+ret->wigName = row[12];
+ret->wigChr = row[13];
+ret->wigGeneticPos = atof(row[14]);
+ret->mgiName = row[15];
+ret->mgiChr = row[16];
+ret->mgiGeneticPos = atof(row[17]);
+ret->rhName = row[18];
+ret->rhChr = row[19];
+ret->rhGeneticPos = atof(row[20]);
+ret->RHLOD = atof(row[21]);
+ret->GeneName = row[22];
+ret->GeneID = row[23];
+ret->clone = row[24];
+}
+
+struct stsInfoMouseNew *stsInfoMouseNewLoad(char **row)
+/* Load a stsInfoMouseNew from row fetched with select * from stsInfoMouseNew
+ * from database.  Dispose of this with stsInfoMouseNewFree(). */
+{
+struct stsInfoMouseNew *ret;
+
+AllocVar(ret);
+ret->identNo = sqlUnsigned(row[0]);
+ret->name = cloneString(row[1]);
+ret->MGIId = sqlUnsigned(row[2]);
+ret->MGIName = cloneString(row[3]);
+ret->UiStsId = sqlUnsigned(row[4]);
+ret->nameCount = sqlUnsigned(row[5]);
+ret->alias = cloneString(row[6]);
+ret->primer1 = cloneString(row[7]);
+ret->primer2 = cloneString(row[8]);
+ret->distance = cloneString(row[9]);
+ret->sequence = sqlUnsigned(row[10]);
+ret->organis = cloneString(row[11]);
+ret->wigName = cloneString(row[12]);
+ret->wigChr = cloneString(row[13]);
+ret->wigGeneticPos = atof(row[14]);
+ret->mgiName = cloneString(row[15]);
+ret->mgiChr = cloneString(row[16]);
+ret->mgiGeneticPos = atof(row[17]);
+ret->rhName = cloneString(row[18]);
+ret->rhChr = cloneString(row[19]);
+ret->rhGeneticPos = atof(row[20]);
+ret->RHLOD = atof(row[21]);
+ret->GeneName = cloneString(row[22]);
+ret->GeneID = cloneString(row[23]);
+ret->clone = cloneString(row[24]);
+return ret;
+}
+
+struct stsInfoMouseNew *stsInfoMouseNewLoadAll(char *fileName) 
+/* Load all stsInfoMouseNew from a whitespace-separated file.
+ * Dispose of this with stsInfoMouseNewFreeList(). */
+{
+struct stsInfoMouseNew *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[25];
+
+while (lineFileRow(lf, row))
+    {
+    el = stsInfoMouseNewLoad(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct stsInfoMouseNew *stsInfoMouseNewLoadAllByChar(char *fileName, char chopper) 
+/* Load all stsInfoMouseNew from a chopper separated file.
+ * Dispose of this with stsInfoMouseNewFreeList(). */
+{
+struct stsInfoMouseNew *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[25];
+
+while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
+    {
+    el = stsInfoMouseNewLoad(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct stsInfoMouseNew *stsInfoMouseNewCommaIn(char **pS, struct stsInfoMouseNew *ret)
+/* Create a stsInfoMouseNew out of a comma separated string. 
+ * This will fill in ret if non-null, otherwise will
+ * return a new stsInfoMouseNew */
+{
+char *s = *pS;
+
+if (ret == NULL)
+    AllocVar(ret);
+ret->identNo = sqlUnsignedComma(&s);
+ret->name = sqlStringComma(&s);
+ret->MGIId = sqlUnsignedComma(&s);
+ret->MGIName = sqlStringComma(&s);
+ret->UiStsId = sqlUnsignedComma(&s);
+ret->nameCount = sqlUnsignedComma(&s);
+ret->alias = sqlStringComma(&s);
+ret->primer1 = sqlStringComma(&s);
+ret->primer2 = sqlStringComma(&s);
+ret->distance = sqlStringComma(&s);
+ret->sequence = sqlUnsignedComma(&s);
+ret->organis = sqlStringComma(&s);
+ret->wigName = sqlStringComma(&s);
+ret->wigChr = sqlStringComma(&s);
+ret->wigGeneticPos = sqlFloatComma(&s);
+ret->mgiName = sqlStringComma(&s);
+ret->mgiChr = sqlStringComma(&s);
+ret->mgiGeneticPos = sqlFloatComma(&s);
+ret->rhName = sqlStringComma(&s);
+ret->rhChr = sqlStringComma(&s);
+ret->rhGeneticPos = sqlFloatComma(&s);
+ret->RHLOD = sqlFloatComma(&s);
+ret->GeneName = sqlStringComma(&s);
+ret->GeneID = sqlStringComma(&s);
+ret->clone = sqlStringComma(&s);
+*pS = s;
+return ret;
+}
+
+void stsInfoMouseNewFree(struct stsInfoMouseNew **pEl)
+/* Free a single dynamically allocated stsInfoMouseNew such as created
+ * with stsInfoMouseNewLoad(). */
+{
+struct stsInfoMouseNew *el;
+
+if ((el = *pEl) == NULL) return;
+freeMem(el->name);
+freeMem(el->MGIName);
+freeMem(el->alias);
+freeMem(el->primer1);
+freeMem(el->primer2);
+freeMem(el->distance);
+freeMem(el->organis);
+freeMem(el->wigName);
+freeMem(el->wigChr);
+freeMem(el->mgiName);
+freeMem(el->mgiChr);
+freeMem(el->rhName);
+freeMem(el->rhChr);
+freeMem(el->GeneName);
+freeMem(el->GeneID);
+freeMem(el->clone);
+freez(pEl);
+}
+
+void stsInfoMouseNewFreeList(struct stsInfoMouseNew **pList)
+/* Free a list of dynamically allocated stsInfoMouseNew's */
+{
+struct stsInfoMouseNew *el, *next;
+
+for (el = *pList; el != NULL; el = next)
+    {
+    next = el->next;
+    stsInfoMouseNewFree(&el);
+    }
+*pList = NULL;
+}
+
+void stsInfoMouseNewOutput(struct stsInfoMouseNew *el, FILE *f, char sep, char lastSep) 
+/* Print out stsInfoMouseNew.  Separate fields with sep. Follow last field with lastSep. */
+{
+fprintf(f, "%u", el->identNo);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->name);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%u", el->MGIId);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->MGIName);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%u", el->UiStsId);
+fputc(sep,f);
+fprintf(f, "%u", el->nameCount);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->alias);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->primer1);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->primer2);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->distance);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%u", el->sequence);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->organis);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->wigName);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->wigChr);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%f", el->wigGeneticPos);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->mgiName);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->mgiChr);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%f", el->mgiGeneticPos);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->rhName);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->rhChr);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+fprintf(f, "%f", el->rhGeneticPos);
+fputc(sep,f);
+fprintf(f, "%f", el->RHLOD);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->GeneName);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->GeneID);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->clone);
+if (sep == ',') fputc('"',f);
+fputc(lastSep,f);
+}
+
+/* -------------------------------- End autoSql Generated Code -------------------------------- */
+