533112afe2a2005e80cdb1f82904ea65032d4302
braney
  Sat Oct 2 11:37:34 2021 -0700
split hg/lib into two separate libaries, one only used by the cgis

diff --git src/hg/lib/gencodeExonSupport.c src/hg/lib/gencodeExonSupport.c
deleted file mode 100644
index 96d383f..0000000
--- src/hg/lib/gencodeExonSupport.c
+++ /dev/null
@@ -1,160 +0,0 @@
-/* gencodeExonSupport.c was originally generated by the autoSql program, which also 
- * generated gencodeExonSupport.h and gencodeExonSupport.sql.  This module links the database and
- * the RAM representation of objects. */
-
-#include "common.h"
-#include "linefile.h"
-#include "dystring.h"
-#include "jksql.h"
-#include "gencodeExonSupport.h"
-
-
-
-char *gencodeExonSupportCommaSepFieldNames = "transcriptId,seqId,seqSrc,exonId,chrom,chromStart,chromEnd";
-
-void gencodeExonSupportStaticLoad(char **row, struct gencodeExonSupport *ret)
-/* Load a row from gencodeExonSupport table into ret.  The contents of ret will
- * be replaced at the next call to this function. */
-{
-
-ret->transcriptId = row[0];
-ret->seqId = row[1];
-ret->seqSrc = row[2];
-ret->exonId = row[3];
-ret->chrom = row[4];
-ret->chromStart = sqlUnsigned(row[5]);
-ret->chromEnd = sqlUnsigned(row[6]);
-}
-
-struct gencodeExonSupport *gencodeExonSupportLoad(char **row)
-/* Load a gencodeExonSupport from row fetched with select * from gencodeExonSupport
- * from database.  Dispose of this with gencodeExonSupportFree(). */
-{
-struct gencodeExonSupport *ret;
-
-AllocVar(ret);
-ret->transcriptId = cloneString(row[0]);
-ret->seqId = cloneString(row[1]);
-ret->seqSrc = cloneString(row[2]);
-ret->exonId = cloneString(row[3]);
-ret->chrom = cloneString(row[4]);
-ret->chromStart = sqlUnsigned(row[5]);
-ret->chromEnd = sqlUnsigned(row[6]);
-return ret;
-}
-
-struct gencodeExonSupport *gencodeExonSupportLoadAll(char *fileName) 
-/* Load all gencodeExonSupport from a whitespace-separated file.
- * Dispose of this with gencodeExonSupportFreeList(). */
-{
-struct gencodeExonSupport *list = NULL, *el;
-struct lineFile *lf = lineFileOpen(fileName, TRUE);
-char *row[7];
-
-while (lineFileRow(lf, row))
-    {
-    el = gencodeExonSupportLoad(row);
-    slAddHead(&list, el);
-    }
-lineFileClose(&lf);
-slReverse(&list);
-return list;
-}
-
-struct gencodeExonSupport *gencodeExonSupportLoadAllByChar(char *fileName, char chopper) 
-/* Load all gencodeExonSupport from a chopper separated file.
- * Dispose of this with gencodeExonSupportFreeList(). */
-{
-struct gencodeExonSupport *list = NULL, *el;
-struct lineFile *lf = lineFileOpen(fileName, TRUE);
-char *row[7];
-
-while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
-    {
-    el = gencodeExonSupportLoad(row);
-    slAddHead(&list, el);
-    }
-lineFileClose(&lf);
-slReverse(&list);
-return list;
-}
-
-struct gencodeExonSupport *gencodeExonSupportCommaIn(char **pS, struct gencodeExonSupport *ret)
-/* Create a gencodeExonSupport out of a comma separated string. 
- * This will fill in ret if non-null, otherwise will
- * return a new gencodeExonSupport */
-{
-char *s = *pS;
-
-if (ret == NULL)
-    AllocVar(ret);
-ret->transcriptId = sqlStringComma(&s);
-ret->seqId = sqlStringComma(&s);
-ret->seqSrc = sqlStringComma(&s);
-ret->exonId = sqlStringComma(&s);
-ret->chrom = sqlStringComma(&s);
-ret->chromStart = sqlUnsignedComma(&s);
-ret->chromEnd = sqlUnsignedComma(&s);
-*pS = s;
-return ret;
-}
-
-void gencodeExonSupportFree(struct gencodeExonSupport **pEl)
-/* Free a single dynamically allocated gencodeExonSupport such as created
- * with gencodeExonSupportLoad(). */
-{
-struct gencodeExonSupport *el;
-
-if ((el = *pEl) == NULL) return;
-freeMem(el->transcriptId);
-freeMem(el->seqId);
-freeMem(el->seqSrc);
-freeMem(el->exonId);
-freeMem(el->chrom);
-freez(pEl);
-}
-
-void gencodeExonSupportFreeList(struct gencodeExonSupport **pList)
-/* Free a list of dynamically allocated gencodeExonSupport's */
-{
-struct gencodeExonSupport *el, *next;
-
-for (el = *pList; el != NULL; el = next)
-    {
-    next = el->next;
-    gencodeExonSupportFree(&el);
-    }
-*pList = NULL;
-}
-
-void gencodeExonSupportOutput(struct gencodeExonSupport *el, FILE *f, char sep, char lastSep) 
-/* Print out gencodeExonSupport.  Separate fields with sep. Follow last field with lastSep. */
-{
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->transcriptId);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->seqId);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->seqSrc);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->exonId);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->chrom);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-fprintf(f, "%u", el->chromStart);
-fputc(sep,f);
-fprintf(f, "%u", el->chromEnd);
-fputc(lastSep,f);
-}
-
-/* -------------------------------- End autoSql Generated Code -------------------------------- */
-