533112afe2a2005e80cdb1f82904ea65032d4302 braney Sat Oct 2 11:37:34 2021 -0700 split hg/lib into two separate libaries, one only used by the cgis diff --git src/hg/lib/stsMapMouseNew.c src/hg/lib/stsMapMouseNew.c deleted file mode 100644 index 3617456..0000000 --- src/hg/lib/stsMapMouseNew.c +++ /dev/null @@ -1,206 +0,0 @@ -/* stsMapMouseNew.c was originally generated by the autoSql program, which also - * generated stsMapMouseNew.h and stsMapMouseNew.sql. This module links the database and - * the RAM representation of objects. */ - -/* Copyright (C) 2014 The Regents of the University of California - * See README in this or parent directory for licensing information. */ - -#include "common.h" -#include "linefile.h" -#include "dystring.h" -#include "jksql.h" -#include "stsMapMouseNew.h" - - -void stsMapMouseNewStaticLoad(char **row, struct stsMapMouseNew *ret) -/* Load a row from stsMapMouseNew table into ret. The contents of ret will - * be replaced at the next call to this function. */ -{ - -ret->chrom = row[0]; -ret->chromStart = sqlSigned(row[1]); -ret->chromEnd = sqlUnsigned(row[2]); -ret->name = row[3]; -ret->score = sqlUnsigned(row[4]); -ret->identNo = sqlUnsigned(row[5]); -ret->ctgAcc = row[6]; -ret->otherAcc = row[7]; -ret->rhChrom = row[8]; -ret->rhPos = atof(row[9]); -ret->rhLod = atof(row[10]); -ret->wigChr = row[11]; -ret->wigPos = atof(row[12]); -ret->mgiChrom = row[13]; -ret->mgiPos = atof(row[14]); -} - -struct stsMapMouseNew *stsMapMouseNewLoad(char **row) -/* Load a stsMapMouseNew from row fetched with select * from stsMapMouseNew - * from database. Dispose of this with stsMapMouseNewFree(). */ -{ -struct stsMapMouseNew *ret; - -AllocVar(ret); -ret->chrom = cloneString(row[0]); -ret->chromStart = sqlSigned(row[1]); -ret->chromEnd = sqlUnsigned(row[2]); -ret->name = cloneString(row[3]); -ret->score = sqlUnsigned(row[4]); -ret->identNo = sqlUnsigned(row[5]); -ret->ctgAcc = cloneString(row[6]); -ret->otherAcc = cloneString(row[7]); -ret->rhChrom = cloneString(row[8]); -ret->rhPos = atof(row[9]); -ret->rhLod = atof(row[10]); -ret->wigChr = cloneString(row[11]); -ret->wigPos = atof(row[12]); -ret->mgiChrom = cloneString(row[13]); -ret->mgiPos = atof(row[14]); -return ret; -} - -struct stsMapMouseNew *stsMapMouseNewLoadAll(char *fileName) -/* Load all stsMapMouseNew from a whitespace-separated file. - * Dispose of this with stsMapMouseNewFreeList(). */ -{ -struct stsMapMouseNew *list = NULL, *el; -struct lineFile *lf = lineFileOpen(fileName, TRUE); -char *row[15]; - -while (lineFileRow(lf, row)) - { - el = stsMapMouseNewLoad(row); - slAddHead(&list, el); - } -lineFileClose(&lf); -slReverse(&list); -return list; -} - -struct stsMapMouseNew *stsMapMouseNewLoadAllByChar(char *fileName, char chopper) -/* Load all stsMapMouseNew from a chopper separated file. - * Dispose of this with stsMapMouseNewFreeList(). */ -{ -struct stsMapMouseNew *list = NULL, *el; -struct lineFile *lf = lineFileOpen(fileName, TRUE); -char *row[15]; - -while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) - { - el = stsMapMouseNewLoad(row); - slAddHead(&list, el); - } -lineFileClose(&lf); -slReverse(&list); -return list; -} - -struct stsMapMouseNew *stsMapMouseNewCommaIn(char **pS, struct stsMapMouseNew *ret) -/* Create a stsMapMouseNew out of a comma separated string. - * This will fill in ret if non-null, otherwise will - * return a new stsMapMouseNew */ -{ -char *s = *pS; - -if (ret == NULL) - AllocVar(ret); -ret->chrom = sqlStringComma(&s); -ret->chromStart = sqlSignedComma(&s); -ret->chromEnd = sqlUnsignedComma(&s); -ret->name = sqlStringComma(&s); -ret->score = sqlUnsignedComma(&s); -ret->identNo = sqlUnsignedComma(&s); -ret->ctgAcc = sqlStringComma(&s); -ret->otherAcc = sqlStringComma(&s); -ret->rhChrom = sqlStringComma(&s); -ret->rhPos = sqlFloatComma(&s); -ret->rhLod = sqlFloatComma(&s); -ret->wigChr = sqlStringComma(&s); -ret->wigPos = sqlFloatComma(&s); -ret->mgiChrom = sqlStringComma(&s); -ret->mgiPos = sqlFloatComma(&s); -*pS = s; -return ret; -} - -void stsMapMouseNewFree(struct stsMapMouseNew **pEl) -/* Free a single dynamically allocated stsMapMouseNew such as created - * with stsMapMouseNewLoad(). */ -{ -struct stsMapMouseNew *el; - -if ((el = *pEl) == NULL) return; -freeMem(el->chrom); -freeMem(el->name); -freeMem(el->ctgAcc); -freeMem(el->otherAcc); -freeMem(el->rhChrom); -freeMem(el->wigChr); -freeMem(el->mgiChrom); -freez(pEl); -} - -void stsMapMouseNewFreeList(struct stsMapMouseNew **pList) -/* Free a list of dynamically allocated stsMapMouseNew's */ -{ -struct stsMapMouseNew *el, *next; - -for (el = *pList; el != NULL; el = next) - { - next = el->next; - stsMapMouseNewFree(&el); - } -*pList = NULL; -} - -void stsMapMouseNewOutput(struct stsMapMouseNew *el, FILE *f, char sep, char lastSep) -/* Print out stsMapMouseNew. Separate fields with sep. Follow last field with lastSep. */ -{ -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->chrom); -if (sep == ',') fputc('"',f); -fputc(sep,f); -fprintf(f, "%d", el->chromStart); -fputc(sep,f); -fprintf(f, "%u", el->chromEnd); -fputc(sep,f); -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->name); -if (sep == ',') fputc('"',f); -fputc(sep,f); -fprintf(f, "%u", el->score); -fputc(sep,f); -fprintf(f, "%u", el->identNo); -fputc(sep,f); -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->ctgAcc); -if (sep == ',') fputc('"',f); -fputc(sep,f); -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->otherAcc); -if (sep == ',') fputc('"',f); -fputc(sep,f); -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->rhChrom); -if (sep == ',') fputc('"',f); -fputc(sep,f); -fprintf(f, "%f", el->rhPos); -fputc(sep,f); -fprintf(f, "%f", el->rhLod); -fputc(sep,f); -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->wigChr); -if (sep == ',') fputc('"',f); -fputc(sep,f); -fprintf(f, "%f", el->wigPos); -fputc(sep,f); -if (sep == ',') fputc('"',f); -fprintf(f, "%s", el->mgiChrom); -if (sep == ',') fputc('"',f); -fputc(sep,f); -fprintf(f, "%f", el->mgiPos); -fputc(lastSep,f); -} - -/* -------------------------------- End autoSql Generated Code -------------------------------- */ -