3e628c524315ae7d3de8aac5d422c86cdabebcb7 lrnassar Tue Oct 5 16:56:01 2021 -0700 Releasing updated lrg tracks refs #24672 diff --git src/hg/makeDb/trackDb/human/trackDb.ra src/hg/makeDb/trackDb/human/trackDb.ra index 8be6dc6..2a3a571 100644 --- src/hg/makeDb/trackDb/human/trackDb.ra +++ src/hg/makeDb/trackDb/human/trackDb.ra @@ -3143,54 +3143,30 @@ altColor 127,127,127 baseColorDefault genomicCodons baseColorUseSequence lfExtra indelDoubleInsert on indelPolyA on indelQueryInsert on showDiffBasesAllScales . showDiffBasesMaxZoom 10000.0 showCdsAllScales . showCdsMaxZoom 10000.0 color 54,125,29 urlLabel Link to LRG transcript url http://ftp.ebi.ac.uk/pub/databases/lrgex/$<_lrgParent>.xml#transcripts_anchor bigDataUrl /gbdb/$D/bbi/lrgBigPsl.bb searchIndex name -release alpha - -track lrgTranscriptAli -shortLabel LRG Transcripts -longLabel Locus Reference Genomic (LRG) Fixed Transcript Annotations -group genes -visibility hide -type psl . -cdsTable lrgCds -cdnaTable lrgCdna -pepTable lrgPep -baseColorDefault diffCodons -baseColorUseCds table lrgCds -baseColorUseSequence table lrgCdna -indelDoubleInsert on -indelQueryInsert on -showDiffBasesAllScales . -showDiffBasesMaxZoom 10000.0 -showCdsAllScales . -showCdsMaxZoom 10000.0 -color 54,125,29 -urlLabel Link to LRG transcript: -url http://ftp.ebi.ac.uk/pub/databases/lrgex/$$.xml#transcripts_anchor -release beta,public track affyHuEx1 shortLabel Affy HuEx 1.0 longLabel Affymetrix Human Exon 1.0 Probe Sets group expression visibility hide url http://www.affymetrix.com/analysis/netaffx/exon/probe_set.affx?pk=1:$$ urlLabel Netaffx Link: useScore 1 type bed 6 . track affyHumanExon shortLabel Affy All Exon longLabel Affymetrix All Exon Chips group expression