f9c9ff4d1f24831e1957d6cbf4214072abfb4001
dschmelt
  Tue Nov 2 11:07:02 2021 -0700
staging jaspar 2022 track and mouse tracks refs #28322

diff --git src/hg/makeDb/doc/hg19.txt src/hg/makeDb/doc/hg19.txt
index 517fb52..438ae47 100644
--- src/hg/makeDb/doc/hg19.txt
+++ src/hg/makeDb/doc/hg19.txt
@@ -34657,19 +34657,36 @@
     cd ~/kent/src/hg/makeDb/trackDb 
     v human/jaspar.ra 
     curl http://expdata.cmmt.ubc.ca/JASPAR/UCSC_tracks/hg19/trackDb.txt >> human/jaspar.ra 
     cd /hive/data/genomes/hg19/bed
     mkdir jaspar
     cd jaspar
     wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2018/hg19/JASPAR2018_hg19_all_chr.bb
     wget http://expdata.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2020/JASPAR2020_hg19.bb
     mv JASPAR2020_hg19.bb JASPAR2020.bb
     mv JASPAR2018_hg19_all_chr.bb JASPAR2018.bb
     cd /gbdb/hg19
     mkdir jaspar
     cd jaspar
     ln -s /hive/data/genomes/hg19/bed/jaspar/JASPAR2018.bb .
     ln -s /hive/data/genomes/hg19/bed/jaspar/JASPAR2020.bb .
+    tdb
     v human/jaspar.html  
     curl http://expdata.cmmt.ubc.ca/JASPAR/UCSC_tracks/JASPAR2018_TFBS_help.html >> human/jaspar.html 
 
 ###############################################################################
+
+# JASPAR 2022 track addition by Daniel 10/11/21
+
+cd ~/kent/src/hg/makeDb/trackDb
+curl http://expdata.cmmt.ubc.ca/JASPAR/UCSC_tracks/hg19/trackDb.txt | head -n16 >> human/jaspar.ra
+v human/jaspar.ra
+cd /hive/data/genomes/hg19/bed/jaspar
+wget http://expdatdbta.cmmt.ubc.ca/JASPAR/downloads/UCSC_tracks/2022/JASPAR2022_hg19.bb
+mv JASPAR2022_hg19.bb JASPAR2022.bb
+cd /gbdb/hg19/jaspar
+ln -s /hive/data/genomes/hg19/bed/jaspar/JASPAR2022.bb .
+tdb
+v human/jaspar.html
+
+
+