10a26eb6cecb17fd722e6f9bad1656329f733c28 dschmelt Tue Nov 2 16:11:00 2021 -0700 Adding note about defined regions refs#28436 diff --git src/hg/makeDb/trackDb/human/dbSnp153Composite.html src/hg/makeDb/trackDb/human/dbSnp153Composite.html index 5398446..f489a79 100644 --- src/hg/makeDb/trackDb/human/dbSnp153Composite.html +++ src/hg/makeDb/trackDb/human/dbSnp153Composite.html @@ -426,32 +426,32 @@ bigDbSnp.as schema with the information necessary for filtering and displaying the variants, as well as a separate file containing more detailed information to be displayed on each variant's details page (dbSnpDetails.as schema).
Since dbSNP has grown to include approximately 700 million variants, the size of the All dbSNP (153) subtrack can cause the Table Browser and Data Integrator to time out, leading to a blank page or truncated output, -unless queries are restricted to a chromosomal region or -to a specific set of rs# IDs (which can be pasted/uploaded into the Table Browser), +unless queries are restricted to a chromosomal region, to particular defined regions, to a specific set +of rs# IDs (which can be pasted/uploaded into the Table Browser), or to one of the subset tracks such as Common (~15 million variants) or ClinVar (~0.5M variants).
For automated analysis, the track data files can be downloaded from the downloads server for hg19 and hg38.
file | format | subtrack | ||
---|---|---|---|---|
dbSnp153.bb | hg19 |