1e87a5e306cb4602fb6781077be0265db2d58c4f
hiram
  Wed Dec 1 11:29:46 2021 -0800
update scripts for new location refs #28331

diff --git src/hg/utils/otto/grcIncident/verifyTransfer.sh src/hg/utils/otto/grcIncident/verifyTransfer.sh
deleted file mode 100755
index 60163a5..0000000
--- src/hg/utils/otto/grcIncident/verifyTransfer.sh
+++ /dev/null
@@ -1,47 +0,0 @@
-#!/bin/bash
-
-export TOP="/hive/data/outside/grc/incidentDb"
-cd "${TOP}"
-export ECHO="/bin/echo -e"
-export bbiInfo="/cluster/bin/x86_64/bigBedInfo"
-
-if [[ $# == 0 ]]; then
-    ${ECHO} "usage: verifyTransfer.sh <DbName> [MoreDbNames]" 1>&2
-    ${ECHO} "e.g.: verifyTransfer.sh Hg19 Mm9 DanRer7" 1>&2
-    exit 255
-fi
-
-export returnCode=0
-
-export tmpFile="/tmp/incidentVerify.$$.txt"
-for Db in $*
-do
-    a=`echo -n "${Db:0:1}" | tr "[:upper:]" "[:lower:]"`
-    db=`echo -n "${a}${Db:1}"`
-    rm -f "${tmpFile}"
-    file="${Db}.grcIncidentDb.bb"
-    ${bbiInfo} "${file}" > "${tmpFile}"
-    itemCount0=`grep itemCount "${tmpFile}" | sed -e 's/,//g' | awk '{print $2}'`
-    sum0=`cat "${tmpFile}" | md5sum | awk '{print $1}'`
-    url=`/cluster/bin/x86_64/hgsql -N -e "select * from grcIncidentDb;" $db`
-    rm -f "${tmpFile}"
-    rm -fr ${TOP}/udcCache
-    mkdir ${TOP}/udcCache
-    ${bbiInfo} -udcDir=${TOP}/udcCache "${url}" > "${tmpFile}"
-    itemCount1=`grep itemCount "${tmpFile}" | sed -e 's/,//g' | awk '{print $2}'`
-    sum1=`cat "${tmpFile}" | md5sum | awk '{print $1}'`
-    if [ ${itemCount0} -lt 1 ]; then
-	${ECHO} "ERROR: item count for $Db failing: ${itemCount0} < 1" 1>&2
-    fi
-    if [ ${itemCount0} -ne ${itemCount1} ]; then
-	${ECHO} "ERROR: item count for $Db failing: ${itemCount0} != ${itemCount1}" 1>&2
-	returnCode=255
-    fi
-    if [ "${sum0}" != "${sum1}" ]; then
-	${ECHO} "ERROR: info check sum for $Db failing: ${sum0} != ${sum1}" 1>&2
-	returnCode=255
-    fi
-done
-
-rm -f "${tmpFile}"
-exit $returnCode