4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/inc/hgHgvs.h src/hg/inc/hgHgvs.h index 1c43023..752cb06 100644 --- src/hg/inc/hgHgvs.h +++ src/hg/inc/hgHgvs.h @@ -1,21 +1,21 @@ /* hgHgvs - support for a subset of the Human Genome Variation Society's (HGVS) nomenclature * for describing variants with respect to a specific gene sequence (or genome assembly). * See http://www.hgvs.org/mutnomen/ */ /* Copyright (C) 2016 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #ifndef HGHGVS_H #define HGHGVS_H #include "bed.h" #include "dnaseq.h" #include "seqWindow.h" #include "variantProjector.h" /* The full nomenclature is extremely complicated, able to encode things such as gene fusions and * advanced clinical info (e.g. "=/" for somatic mosaicism, "=//" for chimerism). UCSC supports * substitutions, insertions, deletions, duplications and inversions. Conversions are parsed out * of HGVS terms but not detected in genomic variants when generating HGVS terms. * UCSC does not fully support repeated sequences because in practice they seem to be frequently * incorrect and inherently error-prone.