4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/oneShot/agpAddCtgNamesAndGaps/agpAddCtgNamesAndGaps.c src/hg/oneShot/agpAddCtgNamesAndGaps/agpAddCtgNamesAndGaps.c
index 0aa8c40..3051382 100644
--- src/hg/oneShot/agpAddCtgNamesAndGaps/agpAddCtgNamesAndGaps.c
+++ src/hg/oneShot/agpAddCtgNamesAndGaps/agpAddCtgNamesAndGaps.c
@@ -1,17 +1,17 @@
 /* Copyright (C) 2007 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 /* agpAddCtgNamesAndGaps - Add component names to AGP where there are multiple 
 * components contributing to one accession with gaps getween them. e.g.
 * Zv7_scaffold2543        228414  260893  29      D       BX649254.13     1 
 * 32480   +
 * Zv7_scaffold2543        260894  260993  30      N       100     fragment no
 * Zv7_scaffold2543        260994  326741  31      D       BX649254.13     32581
 * 98328   +
 * Zv7_scaffold2543        326742  326841  32      N       100     fragment no
 * The BX649254.13 accession is changed to the name given for this fragment in 
 * the contigs FASTA file. Also, add gaps between scaffolds. This was written 
 * to process the randoms contigs agp file for danRer5. 
 * Input: file of fragment parts' names and positions (relative to accession),
 * agp file, output file.
 * Example of line from fragment parts' file (from contigs FASTA headers):