4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/regulate/companion/regCompanionPickEnhancers/regCompanionPickEnhancers.c src/hg/regulate/companion/regCompanionPickEnhancers/regCompanionPickEnhancers.c
index 90af564..710f0ab 100644
--- src/hg/regulate/companion/regCompanionPickEnhancers/regCompanionPickEnhancers.c
+++ src/hg/regulate/companion/regCompanionPickEnhancers/regCompanionPickEnhancers.c
@@ -1,17 +1,17 @@
 /* Copyright (C) 2011 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 /* regCompanionPickEnhancers - Pick enhancer regions by a number of criteria. 
  *  o Start with the top 50,000 DNAse peaks for the cell line.
  *  o No overlap with CTCF peak.
  *  o No overlap with promoter (+-100 bytes from txStart)
  *  o Minimal transcription within 100 bases on either side(< 10 average)
  *  o h3k4me1 average 1000 bases centered on DNAse site is > 30
  * This program will pick enhancers based on just one cell line at a time.  
  * Up to regCompanionFindConcordant to pair up with genes and go for the more refined set. 
  *
  * If the loose parameters are used, instead start with top 100,000 dnase peaks,
  * extend h3k4me1 area to 1200, and reduce average to 20. */
 
 #include "common.h"
 #include "linefile.h"