4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/lib/vcfBits.c src/lib/vcfBits.c index 75d3a05..5872bab 100644 --- src/lib/vcfBits.c +++ src/lib/vcfBits.c @@ -1,25 +1,25 @@ /* vcfBits.c/.h: Variant Call Format, analysis by bit maps. * The routines found here are dependent upon vcf.c/.h for accessing vcf records. * They allow analysis of a set of vcf records by bit maps with one bit map per variant * location and where each haplotype covered by the vcf record is represented by a single * bit (or pair of bits). Additional analysis can be performed by creating haplotype based * bit maps from variant bit maps. There is one haplotype bit map for each haplotype * (subject chromosome) with one (or two) bits for each variant location in the set of records. */ /* Copyright (C) 2013 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #include "common.h" #include "dnautil.h" #include "errAbort.h" #include <limits.h> #include "localmem.h" #include "net.h" #include "regexHelper.h" #include "vcf.h" #include "vcfBits.h" static struct variantBits *vcfOneRecordToVariantBits(struct vcfFile *vcff,struct vcfRecord *record, boolean phasedOnly, boolean homozygousOnly) // Returns bit array covering all genotypes/haplotype/alleles per record. One slot per genotype