4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/cgilib/flyreg2.c src/hg/cgilib/flyreg2.c index f0472fc..61f6299 100644 --- src/hg/cgilib/flyreg2.c +++ src/hg/cgilib/flyreg2.c @@ -1,154 +1,154 @@ /* flyreg2.c was originally generated by the autoSql program, which also * generated flyreg2.h and flyreg2.sql. This module links the database and * the RAM representation of objects. */ /* Copyright (C) 2014 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #include "common.h" #include "linefile.h" #include "dystring.h" #include "jksql.h" #include "flyreg2.h" void flyreg2StaticLoad(char **row, struct flyreg2 *ret) /* Load a row from flyreg2 table into ret. The contents of ret will * be replaced at the next call to this function. */ { ret->chrom = row[0]; ret->chromStart = sqlUnsigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = row[3]; ret->target = row[4]; ret->pmid = sqlUnsigned(row[5]); ret->fpid = sqlUnsigned(row[6]); } struct flyreg2 *flyreg2Load(char **row) /* Load a flyreg2 from row fetched with select * from flyreg2 * from database. Dispose of this with flyreg2Free(). */ { struct flyreg2 *ret; AllocVar(ret); ret->chrom = cloneString(row[0]); ret->chromStart = sqlUnsigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = cloneString(row[3]); ret->target = cloneString(row[4]); ret->pmid = sqlUnsigned(row[5]); ret->fpid = sqlUnsigned(row[6]); return ret; } struct flyreg2 *flyreg2LoadAll(char *fileName) /* Load all flyreg2 from a whitespace-separated file. * Dispose of this with flyreg2FreeList(). */ { struct flyreg2 *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[7]; while (lineFileRow(lf, row)) { el = flyreg2Load(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct flyreg2 *flyreg2LoadAllByChar(char *fileName, char chopper) /* Load all flyreg2 from a chopper separated file. * Dispose of this with flyreg2FreeList(). */ { struct flyreg2 *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[7]; while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) { el = flyreg2Load(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct flyreg2 *flyreg2CommaIn(char **pS, struct flyreg2 *ret) /* Create a flyreg2 out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new flyreg2 */ { char *s = *pS; if (ret == NULL) AllocVar(ret); ret->chrom = sqlStringComma(&s); ret->chromStart = sqlUnsignedComma(&s); ret->chromEnd = sqlUnsignedComma(&s); ret->name = sqlStringComma(&s); ret->target = sqlStringComma(&s); ret->pmid = sqlUnsignedComma(&s); ret->fpid = sqlUnsignedComma(&s); *pS = s; return ret; } void flyreg2Free(struct flyreg2 **pEl) /* Free a single dynamically allocated flyreg2 such as created * with flyreg2Load(). */ { struct flyreg2 *el; if ((el = *pEl) == NULL) return; freeMem(el->chrom); freeMem(el->name); freeMem(el->target); freez(pEl); } void flyreg2FreeList(struct flyreg2 **pList) /* Free a list of dynamically allocated flyreg2's */ { struct flyreg2 *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; flyreg2Free(&el); } *pList = NULL; } void flyreg2Output(struct flyreg2 *el, FILE *f, char sep, char lastSep) /* Print out flyreg2. Separate fields with sep. Follow last field with lastSep. */ { if (sep == ',') fputc('"',f); fprintf(f, "%s", el->chrom); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->chromStart); fputc(sep,f); fprintf(f, "%u", el->chromEnd); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->name); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->target); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->pmid); fputc(sep,f); fprintf(f, "%u", el->fpid); fputc(lastSep,f); } /* -------------------------------- End autoSql Generated Code -------------------------------- */