4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/cgilib/gbMiscDiff.c src/hg/cgilib/gbMiscDiff.c index d343a1c..ca47866 100644 --- src/hg/cgilib/gbMiscDiff.c +++ src/hg/cgilib/gbMiscDiff.c @@ -1,151 +1,151 @@ /* gbMiscDiff.c was originally generated by the autoSql program, which also * generated gbMiscDiff.h and gbMiscDiff.sql. This module links the database and * the RAM representation of objects. */ /* Copyright (C) 2014 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #include "common.h" #include "linefile.h" #include "dystring.h" #include "jksql.h" #include "gbMiscDiff.h" void gbMiscDiffStaticLoad(char **row, struct gbMiscDiff *ret) /* Load a row from gbMiscDiff table into ret. The contents of ret will * be replaced at the next call to this function. */ { strcpy(ret->acc, row[0]); ret->mrnaStart = sqlSigned(row[1]); ret->mrnaEnd = sqlSigned(row[2]); ret->notes = row[3]; ret->gene = row[4]; ret->replacement = row[5]; } struct gbMiscDiff *gbMiscDiffLoad(char **row) /* Load a gbMiscDiff from row fetched with select * from gbMiscDiff * from database. Dispose of this with gbMiscDiffFree(). */ { struct gbMiscDiff *ret; AllocVar(ret); strcpy(ret->acc, row[0]); ret->mrnaStart = sqlSigned(row[1]); ret->mrnaEnd = sqlSigned(row[2]); ret->notes = cloneString(row[3]); ret->gene = cloneString(row[4]); ret->replacement = cloneString(row[5]); return ret; } struct gbMiscDiff *gbMiscDiffLoadAll(char *fileName) /* Load all gbMiscDiff from a whitespace-separated file. * Dispose of this with gbMiscDiffFreeList(). */ { struct gbMiscDiff *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[6]; while (lineFileRow(lf, row)) { el = gbMiscDiffLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct gbMiscDiff *gbMiscDiffLoadAllByChar(char *fileName, char chopper) /* Load all gbMiscDiff from a chopper separated file. * Dispose of this with gbMiscDiffFreeList(). */ { struct gbMiscDiff *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[6]; while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) { el = gbMiscDiffLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct gbMiscDiff *gbMiscDiffCommaIn(char **pS, struct gbMiscDiff *ret) /* Create a gbMiscDiff out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new gbMiscDiff */ { char *s = *pS; if (ret == NULL) AllocVar(ret); sqlFixedStringComma(&s, ret->acc, sizeof(ret->acc)); ret->mrnaStart = sqlSignedComma(&s); ret->mrnaEnd = sqlSignedComma(&s); ret->notes = sqlStringComma(&s); ret->gene = sqlStringComma(&s); ret->replacement = sqlStringComma(&s); *pS = s; return ret; } void gbMiscDiffFree(struct gbMiscDiff **pEl) /* Free a single dynamically allocated gbMiscDiff such as created * with gbMiscDiffLoad(). */ { struct gbMiscDiff *el; if ((el = *pEl) == NULL) return; freeMem(el->notes); freeMem(el->gene); freeMem(el->replacement); freez(pEl); } void gbMiscDiffFreeList(struct gbMiscDiff **pList) /* Free a list of dynamically allocated gbMiscDiff's */ { struct gbMiscDiff *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; gbMiscDiffFree(&el); } *pList = NULL; } void gbMiscDiffOutput(struct gbMiscDiff *el, FILE *f, char sep, char lastSep) /* Print out gbMiscDiff. Separate fields with sep. Follow last field with lastSep. */ { if (sep == ',') fputc('"',f); fprintf(f, "%s", el->acc); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%d", el->mrnaStart); fputc(sep,f); fprintf(f, "%d", el->mrnaEnd); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->notes); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->gene); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->replacement); if (sep == ',') fputc('"',f); fputc(lastSep,f); } /* -------------------------------- End autoSql Generated Code -------------------------------- */