4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/cgilib/stsMapRat.c src/hg/cgilib/stsMapRat.c
index cb6c917..e2ba140 100644
--- src/hg/cgilib/stsMapRat.c
+++ src/hg/cgilib/stsMapRat.c
@@ -1,188 +1,188 @@
 /* stsMapRat.c was originally generated by the autoSql program, which also 
  * generated stsMapRat.h and stsMapRat.sql.  This module links the database and
  * the RAM representation of objects. */
 
 /* Copyright (C) 2014 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "stsMapRat.h"
 
 
 void stsMapRatStaticLoad(char **row, struct stsMapRat *ret)
 /* Load a row from stsMapRat table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->chrom = row[0];
 ret->chromStart = sqlSigned(row[1]);
 ret->chromEnd = sqlUnsigned(row[2]);
 ret->name = row[3];
 ret->score = sqlUnsigned(row[4]);
 ret->identNo = sqlUnsigned(row[5]);
 ret->ctgAcc = row[6];
 ret->otherAcc = row[7];
 ret->rhChrom = row[8];
 ret->rhPos = atof(row[9]);
 ret->rhLod = atof(row[10]);
 ret->fhhChr = row[11];
 ret->fhhPos = atof(row[12]);
 ret->shrspChrom = row[13];
 ret->shrspPos = atof(row[14]);
 }
 
 struct stsMapRat *stsMapRatLoad(char **row)
 /* Load a stsMapRat from row fetched with select * from stsMapRat
  * from database.  Dispose of this with stsMapRatFree(). */
 {
 struct stsMapRat *ret;
 
 AllocVar(ret);
 ret->chrom = cloneString(row[0]);
 ret->chromStart = sqlSigned(row[1]);
 ret->chromEnd = sqlUnsigned(row[2]);
 ret->name = cloneString(row[3]);
 ret->score = sqlUnsigned(row[4]);
 ret->identNo = sqlUnsigned(row[5]);
 ret->ctgAcc = cloneString(row[6]);
 ret->otherAcc = cloneString(row[7]);
 ret->rhChrom = cloneString(row[8]);
 ret->rhPos = atof(row[9]);
 ret->rhLod = atof(row[10]);
 ret->fhhChr = cloneString(row[11]);
 ret->fhhPos = atof(row[12]);
 ret->shrspChrom = cloneString(row[13]);
 ret->shrspPos = atof(row[14]);
 return ret;
 }
 
 struct stsMapRat *stsMapRatLoadAll(char *fileName) 
 /* Load all stsMapRat from a tab-separated file.
  * Dispose of this with stsMapRatFreeList(). */
 {
 struct stsMapRat *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[15];
 
 while (lineFileRow(lf, row))
     {
     el = stsMapRatLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct stsMapRat *stsMapRatCommaIn(char **pS, struct stsMapRat *ret)
 /* Create a stsMapRat out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new stsMapRat */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->chrom = sqlStringComma(&s);
 ret->chromStart = sqlSignedComma(&s);
 ret->chromEnd = sqlUnsignedComma(&s);
 ret->name = sqlStringComma(&s);
 ret->score = sqlUnsignedComma(&s);
 ret->identNo = sqlUnsignedComma(&s);
 ret->ctgAcc = sqlStringComma(&s);
 ret->otherAcc = sqlStringComma(&s);
 ret->rhChrom = sqlStringComma(&s);
 ret->rhPos = sqlFloatComma(&s);
 ret->rhLod = sqlFloatComma(&s);
 ret->fhhChr = sqlStringComma(&s);
 ret->fhhPos = sqlFloatComma(&s);
 ret->shrspChrom = sqlStringComma(&s);
 ret->shrspPos = sqlFloatComma(&s);
 *pS = s;
 return ret;
 }
 
 void stsMapRatFree(struct stsMapRat **pEl)
 /* Free a single dynamically allocated stsMapRat such as created
  * with stsMapRatLoad(). */
 {
 struct stsMapRat *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->chrom);
 freeMem(el->name);
 freeMem(el->ctgAcc);
 freeMem(el->otherAcc);
 freeMem(el->rhChrom);
 freeMem(el->fhhChr);
 freeMem(el->shrspChrom);
 freez(pEl);
 }
 
 void stsMapRatFreeList(struct stsMapRat **pList)
 /* Free a list of dynamically allocated stsMapRat's */
 {
 struct stsMapRat *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     stsMapRatFree(&el);
     }
 *pList = NULL;
 }
 
 void stsMapRatOutput(struct stsMapRat *el, FILE *f, char sep, char lastSep) 
 /* Print out stsMapRat.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->chrom);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%d", el->chromStart);
 fputc(sep,f);
 fprintf(f, "%u", el->chromEnd);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->name);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->score);
 fputc(sep,f);
 fprintf(f, "%u", el->identNo);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->ctgAcc);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->otherAcc);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->rhChrom);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%f", el->rhPos);
 fputc(sep,f);
 fprintf(f, "%f", el->rhLod);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->fhhChr);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%f", el->fhhPos);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->shrspChrom);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%f", el->shrspPos);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */