4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/cirm/cdw/cdwRunOnIds/cdwRunOnIds.c src/hg/cirm/cdw/cdwRunOnIds/cdwRunOnIds.c
index 3c67d9d..2462793 100644
--- src/hg/cirm/cdw/cdwRunOnIds/cdwRunOnIds.c
+++ src/hg/cirm/cdw/cdwRunOnIds/cdwRunOnIds.c
@@ -1,81 +1,81 @@
 /* cdwRunOnIds - Run a cdw command line program (one that takes startId endId as it's two parameters) for a range of ids, putting it on cdwJob queue.. */
 
 /* Copyright (C) 2013 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 #include "common.h"
 #include "linefile.h"
 #include "hash.h"
 #include "options.h"
 #include "jksql.h"
 #include "cdw.h"
 #include "cdwLib.h"
 
 char *runTable = "cdwTempJob";
 boolean dry = FALSE;
 boolean one = FALSE;
 
 void usage()
 /* Explain usage and exit. */
 {
 errAbort(
   "cdwRunOnIds - Run a cdw command line program (one that takes startId endId as it's two parameters) for a range of ids, putting it on cdwJob queue.\n"
   "usage:\n"
   "   cdwRunOnIds program 'queryString'\n"
   "Where queryString is a SQL command that should return a list of fileIds.\n"
   "Example\n"
   "   cdwRunOnIds cdwFixQualScore 'select fileId from cdwFastqFile where qualMean < 0'"
   "options:\n"
   "   -runTable=%s -job table to use\n"
   "   -dry - just print out what we would do\n"
   "   -one - program takes just a single parameter\n"
   , runTable
   );
 }
 
 /* Command line validation table. */
 static struct optionSpec options[] = {
    {"runTable", OPTION_STRING},
    {"dry", OPTION_BOOLEAN},
    {"one", OPTION_BOOLEAN},
    {NULL, 0},
 };
 
 void cdwRunOnIds(char *program, char *queryString)
 /* cdwRunOnIds - Run a cdw command line program (one that takes startId endId as it's two parameters) for a range of ids, 
  * putting it on cdwJob queue. */
 {
 struct dyString *wrappedQuery = dyStringNew(0);
 sqlDyStringPrintf(wrappedQuery, "%-s", queryString); // trust
 struct sqlConnection *conn = cdwConnectReadWrite();
 struct slName *id, *idList = sqlQuickList(conn, wrappedQuery->string);
 for (id = idList; id != NULL; id = id->next)
     {
     char query[512];
     if (one)
 	sqlSafef(query, sizeof(query), 
 	    "insert into %s (commandLine) values ('%s %s')",
 	    runTable, program, id->name);
     else
 	sqlSafef(query, sizeof(query), 
 	    "insert into %s (commandLine) values ('%s %s %s')",
 	    runTable, program, id->name, id->name);
     if (dry)
         printf("%s\n", query);
     else
 	sqlUpdate(conn, query);
     }
 
 }
 
 int main(int argc, char *argv[])
 /* Process command line. */
 {
 optionInit(&argc, argv, options);
 if (argc != 3)
     usage();
 runTable = optionVal("runTable", runTable);
 dry = optionExists("dry");
 one = optionExists("one");
 cdwRunOnIds(argv[1], argv[2]);
 return 0;
 }