4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/hgGenome/wiggle.c src/hg/hgGenome/wiggle.c index 1b5b3b1..85b8714 100644 --- src/hg/hgGenome/wiggle.c +++ src/hg/hgGenome/wiggle.c @@ -1,102 +1,102 @@ /* wiggle - stuff to process wiggle tracks. * Much of this is lifted from hgText/hgWigText.c */ /* Copyright (C) 2011 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #include "common.h" #include "hash.h" #include "linefile.h" #include "dystring.h" #include "portable.h" #include "obscure.h" #include "jksql.h" #include "cheapcgi.h" #include "cart.h" #include "web.h" #include "bed.h" #include "hdb.h" #include "hui.h" #include "hgColors.h" #include "trackDb.h" #include "customTrack.h" #include "wiggle.h" #include "correlate.h" #include "hgGenome.h" boolean isWiggle(char *db, char *table) /* Return TRUE if db.table is a wiggle. */ { boolean typeWiggle = FALSE; if (db != NULL && table != NULL) { if (isCustomTrack(table)) { struct customTrack *ct = lookupCt(table); if (ct->wiggle) typeWiggle = TRUE; } else { struct hTableInfo *hti = maybeGetHti(db, table); typeWiggle = (hti != NULL && HTI_IS_WIGGLE); } } return(typeWiggle); } struct wiggleDataStream *wigChromRawStats(char *chrom) /* Fetch stats for wig data in chrom. * Returns a wiggleDataStream, free it with wiggleDataStreamFree() */ { char splitTableOrFileName[HDB_MAX_TABLE_STRING]; struct customTrack *ct = NULL; boolean isCustom = FALSE; struct wiggleDataStream *wds = NULL; int operations = wigFetchRawStats; char *table = curTable; /* ct, isCustom, wds are set here */ if (isCustomTrack(table)) { ct = lookupCt(table); isCustom = TRUE; if (! ct->wiggle) errAbort("called to work on a custom track '%s' that isn't wiggle data ?", table); if (ct->dbTrack) safef(splitTableOrFileName, sizeof splitTableOrFileName, "%s", ct->dbTableName); else safef(splitTableOrFileName, sizeof splitTableOrFileName, "%s", ct->wigFile); } wds = wiggleDataStreamNew(); wds->setChromConstraint(wds, chrom); if (isCustom) { if (ct->dbTrack) wds->getData(wds, CUSTOM_TRASH, splitTableOrFileName, operations); else wds->getData(wds, NULL, splitTableOrFileName, operations); } else { if (hFindSplitTable(database, chrom, table, splitTableOrFileName, sizeof splitTableOrFileName, NULL)) { wds->getData(wds, database, splitTableOrFileName, operations); } else errAbort("Track %s not found", table); } return wds; }