4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/inc/cgapSage/cgapSage.h src/hg/inc/cgapSage/cgapSage.h
index de73fb4..10b37b9 100644
--- src/hg/inc/cgapSage/cgapSage.h
+++ src/hg/inc/cgapSage/cgapSage.h
@@ -1,76 +1,76 @@
 /* cgapSage.h was originally generated by the autoSql program, which also 
  * generated cgapSage.c and cgapSage.sql.  This header links the database and
  * the RAM representation of objects. */
 
 /* Copyright (C) 2007 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 #ifndef CGAPSAGE_H
 #define CGAPSAGE_H
 
 #define CGAPSAGE_NUM_COLS 14
 
 struct cgapSage
 /* Mappings and frequencies for CGAP SAGE tags */
     {
     struct cgapSage *next;  /* Next in singly linked list. */
     char *chrom;	/* Reference sequence chromosome or scaffold */
     unsigned chromStart;	/* Start in Chromosome */
     unsigned chromEnd;	/* End in Chromosome */
     char *name;	/* Name */
     unsigned score;	/* Score */
     char strand[2];	/* Strand */
     unsigned thickStart;	/* Thick start */
     unsigned thickEnd;	/* Thick end */
     unsigned numLibs;	/* Number of libraries with data for this tag */
     unsigned *libIds;	/* Ids of libraries (foreign keys) */
     unsigned *freqs;	/* Frequency of each tag per library */
     double *tagTpms;	/* Tag per million measurement of each lib */
     unsigned numSnps;	/* Number of class=single SNPs in this region */
     char **snps;	/* List of SNPs */
     };
 
 struct cgapSage *cgapSageLoad(char **row);
 /* Load a cgapSage from row fetched with select * from cgapSage
  * from database.  Dispose of this with cgapSageFree(). */
 
 struct cgapSage *cgapSageLoadAll(char *fileName);
 /* Load all cgapSage from whitespace-separated file.
  * Dispose of this with cgapSageFreeList(). */
 
 struct cgapSage *cgapSageLoadAllByChar(char *fileName, char chopper);
 /* Load all cgapSage from chopper separated file.
  * Dispose of this with cgapSageFreeList(). */
 
 #define cgapSageLoadAllByTab(a) cgapSageLoadAllByChar(a, '\t');
 /* Load all cgapSage from tab separated file.
  * Dispose of this with cgapSageFreeList(). */
 
 struct cgapSage *cgapSageCommaIn(char **pS, struct cgapSage *ret);
 /* Create a cgapSage out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new cgapSage */
 
 void cgapSageFree(struct cgapSage **pEl);
 /* Free a single dynamically allocated cgapSage such as created
  * with cgapSageLoad(). */
 
 void cgapSageFreeList(struct cgapSage **pList);
 /* Free a list of dynamically allocated cgapSage's */
 
 void cgapSageOutput(struct cgapSage *el, FILE *f, char sep, char lastSep);
 /* Print out cgapSage.  Separate fields with sep. Follow last field with lastSep. */
 
 #define cgapSageTabOut(el,f) cgapSageOutput(el,f,'\t','\n');
 /* Print out cgapSage as a line in a tab-separated file. */
 
 #define cgapSageCommaOut(el,f) cgapSageOutput(el,f,',',',');
 /* Print out cgapSage as a comma separated list including final comma. */
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */
 
 int cgapSageCmp(const void *va, const void *vb);
 /* Compare based on chrom,start,end,name. */
 
 #endif /* CGAPSAGE_H */