4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/inc/encode/encodeErgeTransTransf.h src/hg/inc/encode/encodeErgeTransTransf.h index 0354dfa..a2343cb 100644 --- src/hg/inc/encode/encodeErgeTransTransf.h +++ src/hg/inc/encode/encodeErgeTransTransf.h @@ -1,73 +1,73 @@ /* encodeErgeTransTransf.h was originally generated by the autoSql program, which also * generated encodeErgeTransTransf.c and encodeErgeTransTransf.sql. This header links the database and * the RAM representation of objects. */ /* Copyright (C) 2008 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #ifndef ENCODEERGETRANSTRANSF_H #define ENCODEERGETRANSTRANSF_H #define ENCODEERGETRANSTRANSF_NUM_COLS 14 struct encodeErgeTransTransf /* ENCODE experimental data from dbERGEII */ { struct encodeErgeTransTransf *next; /* Next in singly linked list. */ char *chrom; /* Human chromosome */ unsigned chromStart; /* Start position in chromosome */ unsigned chromEnd; /* End position in chromosome */ char *name; /* Name of read - up to 255 characters */ unsigned score; /* Score from 0-1000. 1000 is best */ char strand[2]; /* Value should be + or - */ unsigned thickStart; /* Start of where display should be thick (start codon) */ unsigned thickEnd; /* End of where display should be thick (stop codon) */ unsigned reserved; /* Always zero for now */ unsigned blockCount; /* Number of separate blocks (regions without gaps) */ unsigned *blockSizes; /* Comma separated list of block sizes */ unsigned *chromStarts; /* Start position of each block in relative to chromStart */ char *Id; /* dbERGEII Id */ char *color; /* RGB color values */ }; struct encodeErgeTransTransf *encodeErgeTransTransfLoad(char **row); /* Load a encodeErgeTransTransf from row fetched with select * from encodeErgeTransTransf * from database. Dispose of this with encodeErgeTransTransfFree(). */ struct encodeErgeTransTransf *encodeErgeTransTransfLoadAll(char *fileName); /* Load all encodeErgeTransTransf from whitespace-separated file. * Dispose of this with encodeErgeTransTransfFreeList(). */ struct encodeErgeTransTransf *encodeErgeTransTransfLoadAllByChar(char *fileName, char chopper); /* Load all encodeErgeTransTransf from chopper separated file. * Dispose of this with encodeErgeTransTransfFreeList(). */ #define encodeErgeTransTransfLoadAllByTab(a) encodeErgeTransTransfLoadAllByChar(a, '\t'); /* Load all encodeErgeTransTransf from tab separated file. * Dispose of this with encodeErgeTransTransfFreeList(). */ struct encodeErgeTransTransf *encodeErgeTransTransfCommaIn(char **pS, struct encodeErgeTransTransf *ret); /* Create a encodeErgeTransTransf out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new encodeErgeTransTransf */ void encodeErgeTransTransfFree(struct encodeErgeTransTransf **pEl); /* Free a single dynamically allocated encodeErgeTransTransf such as created * with encodeErgeTransTransfLoad(). */ void encodeErgeTransTransfFreeList(struct encodeErgeTransTransf **pList); /* Free a list of dynamically allocated encodeErgeTransTransf's */ void encodeErgeTransTransfOutput(struct encodeErgeTransTransf *el, FILE *f, char sep, char lastSep); /* Print out encodeErgeTransTransf. Separate fields with sep. Follow last field with lastSep. */ #define encodeErgeTransTransfTabOut(el,f) encodeErgeTransTransfOutput(el,f,'\t','\n'); /* Print out encodeErgeTransTransf as a line in a tab-separated file. */ #define encodeErgeTransTransfCommaOut(el,f) encodeErgeTransTransfOutput(el,f,',',','); /* Print out encodeErgeTransTransf as a comma separated list including final comma. */ /* -------------------------------- End autoSql Generated Code -------------------------------- */ #endif /* ENCODEERGETRANSTRANSF_H */