4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/inc/encode3/encode2Manifest.h src/hg/inc/encode3/encode2Manifest.h index 63e2665..06bc974 100644 --- src/hg/inc/encode3/encode2Manifest.h +++ src/hg/inc/encode3/encode2Manifest.h @@ -1,47 +1,47 @@ /* encode2Manifest - manipulate a line of a manifest file of the type * used for importing data from encode2 into encode3 */ /* Copyright (C) 2013 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #ifndef ENCODE2MANIFEST_H #define ENCODE2MANIFEST_H #define ENCODE2MANIFEST_NUM_COLS 10 struct encode2Manifest /* Information on one file */ { struct encode2Manifest *next; /* Next in singly linked list. */ char *fileName; /* Name of file with directory relative to manifest */ char *format; /* bam fastq etc */ char *outputType; /* aka view - alignment, transfrags, etc. */ char *experiment; /* wgEncodeXXXX */ char *replicate; /* 1 2 both n/a */ char *enrichedIn; /* promoter exon etc. */ char *md5sum; /* Hash of file contents or n/a */ long long size; /* File size. */ long long modifiedTime; /* Time file last modified in seconds since birth of unix */ char *validKey; /* Pass key from validator. */ }; struct encode2Manifest *encode2ManifestLoad(char **row); /* Load a encode2Manifest from row fetched with select * from encode2Manifest * from database. Dispose of this with encode2ManifestFree(). */ struct encode2Manifest *encode2ManifestLoadAll(char *fileName); /* Load all encode2Manifests from file. */ struct encode2Manifest *encode2ManifestShortLoadAll(char *fileName); /* Read a short (just first 6 columns) manifest file. */ void encode2ManifestTabOut(struct encode2Manifest *mi, FILE *f); /* Write tab-separated version of encode2Manifest to f */ void encode2ManifestShortTabOut(struct encode2Manifest *mi, FILE *f); /* Write tab-separated version of encode2Manifest to f */ void encode2ManifestPrintHeader(FILE *f); /* Write out header line. */ #endif /* ENCODE2MANIFEST_H */