4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/inc/hapmapAllelesOrtho.h src/hg/inc/hapmapAllelesOrtho.h
index 8058056..6bb05ef 100644
--- src/hg/inc/hapmapAllelesOrtho.h
+++ src/hg/inc/hapmapAllelesOrtho.h
@@ -1,76 +1,76 @@
 /* hapmapAllelesOrtho.h was originally generated by the autoSql program, which also 
  * generated hapmapAllelesOrtho.c and hapmapAllelesOrtho.sql.  This header links the database and
  * the RAM representation of objects. */
 
 /* Copyright (C) 2007 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 #ifndef HAPMAPALLELESORTHO_H
 #define HAPMAPALLELESORTHO_H
 
 #define HAPMAPALLELESORTHO_NUM_COLS 13
 
 struct hapmapAllelesOrtho
 /* Ortho alleles for HapMap SNPs */
     {
     struct hapmapAllelesOrtho *next;  /* Next in singly linked list. */
     char *chrom;	/* Chromosome */
     unsigned chromStart;	/* Start position in chrom (0 based) */
     unsigned chromEnd;	/* End position in chrom (1 based) */
     char *name;	/* Reference SNP identifier from dbSnp */
     unsigned score;	/* Quality score */
     char strand[2];	/* Which genomic strand contains the observed alleles */
     char *refUCSC;	/* Reference genomic */
     char *observed;	/* dbSNP polymorphism */
     char *orthoChrom;	/* Chromosome in other org */
     unsigned orthoStart;	/* Start position in other org */
     unsigned orthoEnd;	/* End position in other org */
     char orthoStrand[2];	/* Strand in other org */
     char orthoAllele[2];	/* Allele in other org */
     };
 
 void hapmapAllelesOrthoStaticLoad(char **row, struct hapmapAllelesOrtho *ret);
 /* Load a row from hapmapAllelesOrtho table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 
 struct hapmapAllelesOrtho *hapmapAllelesOrthoLoad(char **row);
 /* Load a hapmapAllelesOrtho from row fetched with select * from hapmapAllelesOrtho
  * from database.  Dispose of this with hapmapAllelesOrthoFree(). */
 
 struct hapmapAllelesOrtho *hapmapAllelesOrthoLoadAll(char *fileName);
 /* Load all hapmapAllelesOrtho from whitespace-separated file.
  * Dispose of this with hapmapAllelesOrthoFreeList(). */
 
 struct hapmapAllelesOrtho *hapmapAllelesOrthoLoadAllByChar(char *fileName, char chopper);
 /* Load all hapmapAllelesOrtho from chopper separated file.
  * Dispose of this with hapmapAllelesOrthoFreeList(). */
 
 #define hapmapAllelesOrthoLoadAllByTab(a) hapmapAllelesOrthoLoadAllByChar(a, '\t');
 /* Load all hapmapAllelesOrtho from tab separated file.
  * Dispose of this with hapmapAllelesOrthoFreeList(). */
 
 struct hapmapAllelesOrtho *hapmapAllelesOrthoCommaIn(char **pS, struct hapmapAllelesOrtho *ret);
 /* Create a hapmapAllelesOrtho out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new hapmapAllelesOrtho */
 
 void hapmapAllelesOrthoFree(struct hapmapAllelesOrtho **pEl);
 /* Free a single dynamically allocated hapmapAllelesOrtho such as created
  * with hapmapAllelesOrthoLoad(). */
 
 void hapmapAllelesOrthoFreeList(struct hapmapAllelesOrtho **pList);
 /* Free a list of dynamically allocated hapmapAllelesOrtho's */
 
 void hapmapAllelesOrthoOutput(struct hapmapAllelesOrtho *el, FILE *f, char sep, char lastSep);
 /* Print out hapmapAllelesOrtho.  Separate fields with sep. Follow last field with lastSep. */
 
 #define hapmapAllelesOrthoTabOut(el,f) hapmapAllelesOrthoOutput(el,f,'\t','\n');
 /* Print out hapmapAllelesOrtho as a line in a tab-separated file. */
 
 #define hapmapAllelesOrthoCommaOut(el,f) hapmapAllelesOrthoOutput(el,f,',',',');
 /* Print out hapmapAllelesOrtho as a comma separated list including final comma. */
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */
 
 #endif /* HAPMAPALLELESORTHO_H */