4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/inc/hgSeq.h src/hg/inc/hgSeq.h index 0827251..2dd1959 100644 --- src/hg/inc/hgSeq.h +++ src/hg/inc/hgSeq.h @@ -1,52 +1,52 @@ /* hgSeq - Fetch and format DNA sequence data (to stdout) for gene records. */ /* Copyright (C) 2008 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #ifndef HGSEQ_H #define HGSEQ_H #include "hdb.h" #include "cart.h" #include "bed.h" #ifdef NEVER void hgSeqOptionsHti(struct hTableInfo *hti); /* Print out HTML FORM entries for gene region and sequence display options. * Use defaults from CGI. */ #endif /* NEVER */ void hgSeqOptionsHtiCart(struct hTableInfo *hti, struct cart *cart); /* Print out HTML FORM entries for gene region and sequence display options. * Use defaults from CGI and cart. */ void hgSeqOptions(struct cart *cart, char *db, char *table); /* Print out HTML FORM entries for gene region and sequence display options. */ int hgSeqItemsInRange(char *db, char *table, char *chrom, int chromStart, int chromEnd, char *sqlConstraints); /* Print out dna sequence of all items (that match sqlConstraints, if nonNULL) in the given range in table. Return the number of items. */ void hgSeqRange(char *db, char *chrom, int chromStart, int chromEnd, char strand, char *name); /* Print out dna sequence of the given range. */ int hgSeqBed(char *db, struct hTableInfo *hti, struct bed *bedList); /* Print out dna sequence from the current database of all items in bedList. * hti describes the bed-compatibility level of bedList items. * Returns number of FASTA records printed out. */ int hgSeqBedDb(char *db, struct hTableInfo *hti, struct bed *bedList); /* Print out dna sequence from the given database of all items in bedList. * hti describes the bed-compatibility level of bedList items. * Returns number of FASTA records printed out. */ void hgSeqFeatureRegionOptions(struct cart *cart, boolean canDoUTR, boolean canDoIntrons); /* Print out HTML FORM entries for feature region options. */ void hgSeqDisplayOptions(struct cart *cart, boolean canDoUTR, boolean canDoIntrons, boolean offerRevComp); /* Print out HTML FORM entries for sequence display options. */ #endif /* HGSEQ_H */