4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/inc/ld2.h src/hg/inc/ld2.h
index f5dba2d..4243c8b 100644
--- src/hg/inc/ld2.h
+++ src/hg/inc/ld2.h
@@ -1,75 +1,75 @@
 /* ld2.h was originally generated by the autoSql program, which also 
  * generated ld2.c and ld2.sql.  This header links the database and
  * the RAM representation of objects. */
 
 /* Copyright (C) 2007 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 #ifndef LD2_H
 #define LD2_H
 
 #define LD2_NUM_COLS 12
 
 struct ld2
 /* Linkage Disequilibrium values computed by Haploview and encoded by UCSC. */
     {
     struct ld2 *next;  /* Next in singly linked list. */
     char *chrom;	/* Reference sequence chromosome or scaffold */
     unsigned chromStart;	/* chromStart for reference marker */
     unsigned chromEnd;	/* chromEnd for last marker in list */
     char *name;	/* rsId at chromStart */
     unsigned ldCount;	/* Number of markers with LD values */
     char *dprime;	/* Encoded list (length=ldCount) of D' values */
     char *rsquared;	/* Encoded list (length=ldCount) of r^2 values */
     char *lod;	/* Encoded list (length=ldCount) of LOD values */
     char avgDprime;	/* Encoded average D' magnitude for dense display */
     char avgRsquared;	/* Encoded average r^2 value for dense display */
     char avgLod;	/* Encoded average LOD value for dense display */
     char tInt;	/* Encoded T-int value between this and next marker */
     };
 
 void ld2StaticLoad(char **row, struct ld2 *ret);
 /* Load a row from ld2 table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 
 struct ld2 *ld2Load(char **row);
 /* Load a ld2 from row fetched with select * from ld2
  * from database.  Dispose of this with ld2Free(). */
 
 struct ld2 *ld2LoadAll(char *fileName);
 /* Load all ld2 from whitespace-separated file.
  * Dispose of this with ld2FreeList(). */
 
 struct ld2 *ld2LoadAllByChar(char *fileName, char chopper);
 /* Load all ld2 from chopper separated file.
  * Dispose of this with ld2FreeList(). */
 
 #define ld2LoadAllByTab(a) ld2LoadAllByChar(a, '\t');
 /* Load all ld2 from tab separated file.
  * Dispose of this with ld2FreeList(). */
 
 struct ld2 *ld2CommaIn(char **pS, struct ld2 *ret);
 /* Create a ld2 out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new ld2 */
 
 void ld2Free(struct ld2 **pEl);
 /* Free a single dynamically allocated ld2 such as created
  * with ld2Load(). */
 
 void ld2FreeList(struct ld2 **pList);
 /* Free a list of dynamically allocated ld2's */
 
 void ld2Output(struct ld2 *el, FILE *f, char sep, char lastSep);
 /* Print out ld2.  Separate fields with sep. Follow last field with lastSep. */
 
 #define ld2TabOut(el,f) ld2Output(el,f,'\t','\n');
 /* Print out ld2 as a line in a tab-separated file. */
 
 #define ld2CommaOut(el,f) ld2Output(el,f,',',',');
 /* Print out ld2 as a comma separated list including final comma. */
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */
 
 #endif /* LD2_H */