4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/inc/mafFrames.h src/hg/inc/mafFrames.h
index 0e65ae7..250dfaf 100644
--- src/hg/inc/mafFrames.h
+++ src/hg/inc/mafFrames.h
@@ -1,86 +1,86 @@
 /* mafFrames.h was originally generated by the autoSql program, which also 
  * generated mafFrames.c and mafFrames.sql.  This header links the database and
  * the RAM representation of objects. */
 
 /* Copyright (C) 2008 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 #ifndef MAFFRAMES_H
 #define MAFFRAMES_H
 
 #define MAFFRAMES_NUM_COLS 11
 
 struct mafFrames
 /* codon frame assignment for MAF components */
     {
     struct mafFrames *next;  /* Next in singly linked list. */
     char *chrom;	/* Reference sequence chromosome or scaffold */
     unsigned chromStart;	/* Start range in chromosome */
     unsigned chromEnd;	/* End range in chromosome */
     char *src;	/* Name of sequence source in MAF */
     unsigned char frame;	/* frame (0,1,2) for first base(+) or last bast(-) */
     char strand[2];	/* + or - */
     char *name;	/* Name of gene used to define frame */
     int prevFramePos;	/* target position of the previous base (in transcription direction) that continues this frame, or -1 if none, or frame not contiguous */
     int nextFramePos;	/* target position of the next base (in transcription direction) that continues this frame, or -1 if none, or frame not contiguous */
     unsigned char isExonStart;	/* does this start the CDS portion of an exon? */
     unsigned char isExonEnd;	/* does this end the CDS portion of an exon? */
     };
 
 void mafFramesStaticLoad(char **row, struct mafFrames *ret);
 /* Load a row from mafFrames table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 
 void mafFramesStaticLoadOld(char **row, struct mafFrames *ret);
 /* Load a row from old style mafFrames table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 
 struct mafFrames *mafFramesLoad(char **row);
 /* Load a mafFrames from row fetched with select * from mafFrames
  * from database.  Dispose of this with mafFramesFree(). */
 
 struct mafFrames *mafFramesLoadOld(char **row);
 /* Load an old style mafFrames from row fetched with select * from mafFrames
  * from database.  Dispose of this with mafFramesFree(). */
 
 struct mafFrames *mafFramesLoadAll(char *fileName);
 /* Load all mafFrames from whitespace-separated file.
  * Dispose of this with mafFramesFreeList(). */
 
 struct mafFrames *mafFramesLoadAllByChar(char *fileName, char chopper);
 /* Load all mafFrames from chopper separated file.
  * Dispose of this with mafFramesFreeList(). */
 
 #define mafFramesLoadAllByTab(a) mafFramesLoadAllByChar(a, '\t');
 /* Load all mafFrames from tab separated file.
  * Dispose of this with mafFramesFreeList(). */
 
 struct mafFrames *mafFramesCommaIn(char **pS, struct mafFrames *ret);
 /* Create a mafFrames out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new mafFrames */
 
 void mafFramesFree(struct mafFrames **pEl);
 /* Free a single dynamically allocated mafFrames such as created
  * with mafFramesLoad(). */
 
 void mafFramesFreeList(struct mafFrames **pList);
 /* Free a list of dynamically allocated mafFrames's */
 
 void mafFramesOutput(struct mafFrames *el, FILE *f, char sep, char lastSep);
 /* Print out mafFrames.  Separate fields with sep. Follow last field with lastSep. */
 
 #define mafFramesTabOut(el,f) mafFramesOutput(el,f,'\t','\n');
 /* Print out mafFrames as a line in a tab-separated file. */
 
 #define mafFramesCommaOut(el,f) mafFramesOutput(el,f,',',',');
 /* Print out mafFrames as a comma separated list including final comma. */
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */
 
 char *mafFramesGetSql(char *table, unsigned options, int chromIdxLen);
 /* Get sql to create the table.  Returned string should be freed.  No options
  * are currently defined.*/
 
 #endif /* MAFFRAMES_H */