4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/inc/rnaGenes.h src/hg/inc/rnaGenes.h index 684a0ea..be46584 100644 --- src/hg/inc/rnaGenes.h +++ src/hg/inc/rnaGenes.h @@ -1,73 +1,73 @@ /* rnaGenes.h was originally generated by the autoSql program, which also * generated rnaGenes.c and rnaGenes.sql. This header links the database and * the RAM representation of objects. */ /* Copyright (C) 2004 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #ifndef RNAGENES_H #define RNAGENES_H #define RNAGENES_NUM_COLS 10 struct rnaGenes /* All rna Genes */ { struct rnaGenes *next; /* Next in singly linked list. */ char *chrom; /* Human chromosome or FPC contig */ unsigned chromStart; /* Start position in chromosome */ unsigned chromEnd; /* End position in chromosome */ char *name; /* Other chromosome involved */ unsigned score; /* Score from 900-1000. 1000 is best */ char strand[2]; /* Value should be + or - */ char *aa; /* Amino acid for the tRNA */ char *ac; /* Anticodon for the tRNA */ char ci[2]; /* Contains intron or not: Y or N */ float scan; /* tRNAScanSE score */ }; void rnaGenesStaticLoad(char **row, struct rnaGenes *ret); /* Load a row from rnaGenes table into ret. The contents of ret will * be replaced at the next call to this function. */ struct rnaGenes *rnaGenesLoad(char **row); /* Load a rnaGenes from row fetched with select * from rnaGenes * from database. Dispose of this with rnaGenesFree(). */ struct rnaGenes *rnaGenesLoadAll(char *fileName); /* Load all rnaGenes from whitespace-separated file. * Dispose of this with rnaGenesFreeList(). */ struct rnaGenes *rnaGenesLoadAllByChar(char *fileName, char chopper); /* Load all rnaGenes from chopper separated file. * Dispose of this with rnaGenesFreeList(). */ #define rnaGenesLoadAllByTab(a) rnaGenesLoadAllByChar(a, '\t'); /* Load all rnaGenes from tab separated file. * Dispose of this with rnaGenesFreeList(). */ struct rnaGenes *rnaGenesCommaIn(char **pS, struct rnaGenes *ret); /* Create a rnaGenes out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new rnaGenes */ void rnaGenesFree(struct rnaGenes **pEl); /* Free a single dynamically allocated rnaGenes such as created * with rnaGenesLoad(). */ void rnaGenesFreeList(struct rnaGenes **pList); /* Free a list of dynamically allocated rnaGenes's */ void rnaGenesOutput(struct rnaGenes *el, FILE *f, char sep, char lastSep); /* Print out rnaGenes. Separate fields with sep. Follow last field with lastSep. */ #define rnaGenesTabOut(el,f) rnaGenesOutput(el,f,'\t','\n'); /* Print out rnaGenes as a line in a tab-separated file. */ #define rnaGenesCommaOut(el,f) rnaGenesOutput(el,f,',',','); /* Print out rnaGenes as a comma separated list including final comma. */ /* -------------------------------- End autoSql Generated Code -------------------------------- */ #endif /* RNAGENES_H */