4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/lib/encode/unused/encodeErge5race.c src/hg/lib/encode/unused/encodeErge5race.c
index 9d48f0e..f081158 100644
--- src/hg/lib/encode/unused/encodeErge5race.c
+++ src/hg/lib/encode/unused/encodeErge5race.c
@@ -1,207 +1,207 @@
 /* encodeErge5race.c was originally generated by the autoSql program, which also 
  * generated encodeErge5race.h and encodeErge5race.sql.  This module links the database and
  * the RAM representation of objects. */
 
 /* Copyright (C) 2012 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "encode/encodeErge5race.h"
 
 
 struct encodeErge5race *encodeErge5raceLoad(char **row)
 /* Load a encodeErge5race from row fetched with select * from encodeErge5race
  * from database.  Dispose of this with encodeErge5raceFree(). */
 {
 struct encodeErge5race *ret;
 int sizeOne,i;
 char *s;
 
 AllocVar(ret);
 ret->blockCount = sqlUnsigned(row[9]);
 ret->chrom = cloneString(row[0]);
 ret->chromStart = sqlUnsigned(row[1]);
 ret->chromEnd = sqlUnsigned(row[2]);
 ret->name = cloneString(row[3]);
 ret->score = sqlUnsigned(row[4]);
 strcpy(ret->strand, row[5]);
 ret->thickStart = sqlUnsigned(row[6]);
 ret->thickEnd = sqlUnsigned(row[7]);
 ret->reserved = sqlUnsigned(row[8]);
 sqlUnsignedDynamicArray(row[10], &ret->blockSizes, &sizeOne);
 assert(sizeOne == ret->blockCount);
 sqlUnsignedDynamicArray(row[11], &ret->chromStarts, &sizeOne);
 assert(sizeOne == ret->blockCount);
 ret->Id = cloneString(row[12]);
 ret->color = cloneString(row[13]);
 return ret;
 }
 
 struct encodeErge5race *encodeErge5raceLoadAll(char *fileName) 
 /* Load all encodeErge5race from a whitespace-separated file.
  * Dispose of this with encodeErge5raceFreeList(). */
 {
 struct encodeErge5race *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[14];
 
 while (lineFileRow(lf, row))
     {
     el = encodeErge5raceLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct encodeErge5race *encodeErge5raceLoadAllByChar(char *fileName, char chopper) 
 /* Load all encodeErge5race from a chopper separated file.
  * Dispose of this with encodeErge5raceFreeList(). */
 {
 struct encodeErge5race *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[14];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = encodeErge5raceLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct encodeErge5race *encodeErge5raceCommaIn(char **pS, struct encodeErge5race *ret)
 /* Create a encodeErge5race out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new encodeErge5race */
 {
 char *s = *pS;
 int i;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->chrom = sqlStringComma(&s);
 ret->chromStart = sqlUnsignedComma(&s);
 ret->chromEnd = sqlUnsignedComma(&s);
 ret->name = sqlStringComma(&s);
 ret->score = sqlUnsignedComma(&s);
 sqlFixedStringComma(&s, ret->strand, sizeof(ret->strand));
 ret->thickStart = sqlUnsignedComma(&s);
 ret->thickEnd = sqlUnsignedComma(&s);
 ret->reserved = sqlUnsignedComma(&s);
 ret->blockCount = sqlUnsignedComma(&s);
 s = sqlEatChar(s, '{');
 AllocArray(ret->blockSizes, ret->blockCount);
 for (i=0; i<ret->blockCount; ++i)
     {
     ret->blockSizes[i] = sqlUnsignedComma(&s);
     }
 s = sqlEatChar(s, '}');
 s = sqlEatChar(s, ',');
 s = sqlEatChar(s, '{');
 AllocArray(ret->chromStarts, ret->blockCount);
 for (i=0; i<ret->blockCount; ++i)
     {
     ret->chromStarts[i] = sqlUnsignedComma(&s);
     }
 s = sqlEatChar(s, '}');
 s = sqlEatChar(s, ',');
 ret->Id = sqlStringComma(&s);
 ret->color = sqlStringComma(&s);
 *pS = s;
 return ret;
 }
 
 void encodeErge5raceFree(struct encodeErge5race **pEl)
 /* Free a single dynamically allocated encodeErge5race such as created
  * with encodeErge5raceLoad(). */
 {
 struct encodeErge5race *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->chrom);
 freeMem(el->name);
 freeMem(el->blockSizes);
 freeMem(el->chromStarts);
 freeMem(el->Id);
 freeMem(el->color);
 freez(pEl);
 }
 
 void encodeErge5raceFreeList(struct encodeErge5race **pList)
 /* Free a list of dynamically allocated encodeErge5race's */
 {
 struct encodeErge5race *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     encodeErge5raceFree(&el);
     }
 *pList = NULL;
 }
 
 void encodeErge5raceOutput(struct encodeErge5race *el, FILE *f, char sep, char lastSep) 
 /* Print out encodeErge5race.  Separate fields with sep. Follow last field with lastSep. */
 {
 int i;
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->chrom);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->chromStart);
 fputc(sep,f);
 fprintf(f, "%u", el->chromEnd);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->name);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->score);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->strand);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->thickStart);
 fputc(sep,f);
 fprintf(f, "%u", el->thickEnd);
 fputc(sep,f);
 fprintf(f, "%u", el->reserved);
 fputc(sep,f);
 fprintf(f, "%u", el->blockCount);
 fputc(sep,f);
 if (sep == ',') fputc('{',f);
 for (i=0; i<el->blockCount; ++i)
     {
     fprintf(f, "%u", el->blockSizes[i]);
     fputc(',', f);
     }
 if (sep == ',') fputc('}',f);
 fputc(sep,f);
 if (sep == ',') fputc('{',f);
 for (i=0; i<el->blockCount; ++i)
     {
     fprintf(f, "%u", el->chromStarts[i]);
     fputc(',', f);
     }
 if (sep == ',') fputc('}',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->Id);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->color);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */