4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/lib/encode/wgEncodeGencodeUniProt.c src/hg/lib/encode/wgEncodeGencodeUniProt.c
index a412477..b30b9bc 100644
--- src/hg/lib/encode/wgEncodeGencodeUniProt.c
+++ src/hg/lib/encode/wgEncodeGencodeUniProt.c
@@ -1,145 +1,145 @@
 /* wgEncodeGencodeUniProt.c was originally generated by the autoSql program, which also 
  * generated wgEncodeGencodeUniProt.h and wgEncodeGencodeUniProt.sql.  This module links the database and
  * the RAM representation of objects. */
 
 /* Copyright (C) 2011 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "encode/wgEncodeGencodeUniProt.h"
 
 
 /* definitions for dataset column */
 static char *values_dataset[] = {"SwissProt", "TrEMBL", NULL};
 static struct hash *valhash_dataset = NULL;
 
 void wgEncodeGencodeUniProtStaticLoad(char **row, struct wgEncodeGencodeUniProt *ret)
 /* Load a row from wgEncodeGencodeUniProt table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->transcriptId = row[0];
 ret->acc = row[1];
 ret->name = row[2];
 ret->dataset = sqlEnumParse(row[3], values_dataset, &valhash_dataset);
 }
 
 struct wgEncodeGencodeUniProt *wgEncodeGencodeUniProtLoad(char **row)
 /* Load a wgEncodeGencodeUniProt from row fetched with select * from wgEncodeGencodeUniProt
  * from database.  Dispose of this with wgEncodeGencodeUniProtFree(). */
 {
 struct wgEncodeGencodeUniProt *ret;
 
 AllocVar(ret);
 ret->transcriptId = cloneString(row[0]);
 ret->acc = cloneString(row[1]);
 ret->name = cloneString(row[2]);
 ret->dataset = sqlEnumParse(row[3], values_dataset, &valhash_dataset);
 return ret;
 }
 
 struct wgEncodeGencodeUniProt *wgEncodeGencodeUniProtLoadAll(char *fileName) 
 /* Load all wgEncodeGencodeUniProt from a whitespace-separated file.
  * Dispose of this with wgEncodeGencodeUniProtFreeList(). */
 {
 struct wgEncodeGencodeUniProt *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[4];
 
 while (lineFileRow(lf, row))
     {
     el = wgEncodeGencodeUniProtLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct wgEncodeGencodeUniProt *wgEncodeGencodeUniProtLoadAllByChar(char *fileName, char chopper) 
 /* Load all wgEncodeGencodeUniProt from a chopper separated file.
  * Dispose of this with wgEncodeGencodeUniProtFreeList(). */
 {
 struct wgEncodeGencodeUniProt *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[4];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = wgEncodeGencodeUniProtLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct wgEncodeGencodeUniProt *wgEncodeGencodeUniProtCommaIn(char **pS, struct wgEncodeGencodeUniProt *ret)
 /* Create a wgEncodeGencodeUniProt out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new wgEncodeGencodeUniProt */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->transcriptId = sqlStringComma(&s);
 ret->acc = sqlStringComma(&s);
 ret->name = sqlStringComma(&s);
 ret->dataset = sqlEnumComma(&s, values_dataset, &valhash_dataset);
 *pS = s;
 return ret;
 }
 
 void wgEncodeGencodeUniProtFree(struct wgEncodeGencodeUniProt **pEl)
 /* Free a single dynamically allocated wgEncodeGencodeUniProt such as created
  * with wgEncodeGencodeUniProtLoad(). */
 {
 struct wgEncodeGencodeUniProt *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->transcriptId);
 freeMem(el->acc);
 freeMem(el->name);
 freez(pEl);
 }
 
 void wgEncodeGencodeUniProtFreeList(struct wgEncodeGencodeUniProt **pList)
 /* Free a list of dynamically allocated wgEncodeGencodeUniProt's */
 {
 struct wgEncodeGencodeUniProt *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     wgEncodeGencodeUniProtFree(&el);
     }
 *pList = NULL;
 }
 
 void wgEncodeGencodeUniProtOutput(struct wgEncodeGencodeUniProt *el, FILE *f, char sep, char lastSep) 
 /* Print out wgEncodeGencodeUniProt.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->transcriptId);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->acc);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->name);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 sqlEnumPrint(f, el->dataset, values_dataset);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */