4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/lib/findKGAlias.c src/hg/lib/findKGAlias.c index b9d48df..bbc4e69 100644 --- src/hg/lib/findKGAlias.c +++ src/hg/lib/findKGAlias.c @@ -1,59 +1,59 @@ /* Copyright (C) 2014 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #include "common.h" #include "hCommon.h" #include "hdb.h" #include "errAbort.h" #include "kgAlias.h" static void addKgAlias(struct sqlConnection *conn, struct dyString *query, struct kgAlias **pList) /* Query database and add returned kgAlias to head of list. */ { struct sqlResult *sr = sqlGetResult(conn, query->string); char **row; while ((row = sqlNextRow(sr)) != NULL) { struct kgAlias *kl = kgAliasLoad(row); slAddHead(pList, kl); } sqlFreeResult(&sr); } struct kgAlias *findKGAlias(char *dataBase, char *spec, char *mode) /* findKGAlias Looks up aliases for Known Genes, given a seach spec * mode "E" is for Exact match * mode "F" is for Fuzzy match * mode "P" is for Prefix match * it returns a link list of kgAlias nodes, which contain kgID and Alias */ { struct sqlConnection *conn = hAllocConn(dataBase); struct dyString *ds = newDyString(256); struct kgAlias *kaList = NULL; char fullTableName[256]; safef(fullTableName, 250, "%s.%s", dataBase, "kgAlias"); if (!sqlTableExists(conn, fullTableName)) { errAbort("Table %s.kgAlias does not exist.\n", dataBase); } if (sameString(mode, "E")) { sqlDyStringPrintf(ds, "select * from %s.kgAlias where alias = '%s'", dataBase, spec); } else if (sameString(mode, "F")) { sqlDyStringPrintf(ds, "select * from %s.kgAlias where alias like '%%%s%%'", dataBase, spec); } else if (sameString(mode, "P")) { sqlDyStringPrintf(ds, "select * from %s.kgAlias where alias like '%s%%'", dataBase, spec); } addKgAlias(conn, ds, &kaList); hFreeConn(&conn); return(kaList); }