4898794edd81be5285ea6e544acbedeaeb31bf78 max Tue Nov 23 08:10:57 2021 -0800 Fixing pointers to README file for license in all source code files. refs #27614 diff --git src/hg/lib/newfoo/cytoBand.c src/hg/lib/newfoo/cytoBand.c index 96c14d8..2027c39 100644 --- src/hg/lib/newfoo/cytoBand.c +++ src/hg/lib/newfoo/cytoBand.c @@ -1,120 +1,120 @@ /* cytoBand.c was originally generated by the autoSql program, which also * generated cytoBand.h and cytoBand.sql. This module links the database and the RAM * representation of objects. */ /* Copyright (C) 2011 The Regents of the University of California - * See README in this or parent directory for licensing information. */ + * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */ #include "common.h" #include "jksql.h" #include "cytoBand.h" void cytoBandStaticLoad(char **row, struct cytoBand *ret) /* Load a row from cytoBand table into ret. The contents of ret will * be replaced at the next call to this function. */ { int sizeOne,i; char *s; ret->chrom = row[0]; ret->chromStart = sqlUnsigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = row[3]; ret->gieStain = row[4]; ret->firmStart = sqlUnsigned(row[5]); ret->firmEnd = sqlUnsigned(row[6]); } struct cytoBand *cytoBandLoad(char **row) /* Load a cytoBand from row fetched with select * from cytoBand * from database. Dispose of this with cytoBandFree(). */ { struct cytoBand *ret; int sizeOne,i; char *s; AllocVar(ret); ret->chrom = cloneString(row[0]); ret->chromStart = sqlUnsigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = cloneString(row[3]); ret->gieStain = cloneString(row[4]); ret->firmStart = sqlUnsigned(row[5]); ret->firmEnd = sqlUnsigned(row[6]); return ret; } struct cytoBand *cytoBandCommaIn(char **pS, struct cytoBand *ret) /* Create a cytoBand out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new cytoBand */ { char *s = *pS; int i; if (ret == NULL) AllocVar(ret); ret->chrom = sqlStringComma(&s); ret->chromStart = sqlUnsignedComma(&s); ret->chromEnd = sqlUnsignedComma(&s); ret->name = sqlStringComma(&s); ret->gieStain = sqlStringComma(&s); ret->firmStart = sqlUnsignedComma(&s); ret->firmEnd = sqlUnsignedComma(&s); *pS = s; return ret; } void cytoBandFree(struct cytoBand **pEl) /* Free a single dynamically allocated cytoBand such as created * with cytoBandLoad(). */ { struct cytoBand *el; if ((el = *pEl) == NULL) return; freeMem(el->chrom); freeMem(el->name); freeMem(el->gieStain); freez(pEl); } void cytoBandFreeList(struct cytoBand **pList) /* Free a list of dynamically allocated cytoBand's */ { struct cytoBand *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; cytoBandFree(&el); } *pList = NULL; } void cytoBandOutput(struct cytoBand *el, FILE *f, char sep, char lastSep) /* Print out cytoBand. Separate fields with sep. Follow last field with lastSep. */ { int i; if (sep == ',') fputc('"',f); fprintf(f, "%s", el->chrom, sep); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->chromStart, sep); fputc(sep,f); fprintf(f, "%u", el->chromEnd, sep); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->name, sep); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->gieStain, sep); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->firmStart, sep); fputc(sep,f); fprintf(f, "%u", el->firmEnd, lastSep); fputc(lastSep,f); }