4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/oneShot/getRgdGeneCds/getRgdGeneCds.c src/hg/oneShot/getRgdGeneCds/getRgdGeneCds.c
index 0fab0e6..6406af5 100644
--- src/hg/oneShot/getRgdGeneCds/getRgdGeneCds.c
+++ src/hg/oneShot/getRgdGeneCds/getRgdGeneCds.c
@@ -1,72 +1,72 @@
 /* getRgdGeneCds - calculates the min(start)-1 and max(end) of 
    the CDS records of RGD genes raw data. */
 
 /* Copyright (C) 2013 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 
 #include "common.h"
 #include "hCommon.h"
 #include "hdb.h"
 
 void usage()
 /* Explain usage and exit. */
 {
 errAbort(
   "getRgdGeneCds - this program calculates the min(start)-1 and max(end) of \n"
   "                the CDS records of RGD genes raw data.\n"
   "usage:\n"
   "   getRgdGeneCds db\n"
   "      db is the database name\n"
   "example: getRgdGeneCds rn4\n");
 }
 
 int main(int argc, char *argv[])
 {
 char *database;
 
 struct sqlConnection *conn2, *conn3;
 char query2[256], query3[256];
 struct sqlResult *sr2, *sr3;
 char **row2, **row3;
 
 char *rgdId;
 
 char *cdsStart, *cdsEnd;
 if (argc != 2) usage();
 database  = argv[1];
    
 conn2= hAllocConn(database);
 conn3= hAllocConn(database);
 	
 sqlSafef(query2, sizeof query2, "select distinct rgdId from rgdGeneRaw2gene");
 sr2 = sqlMustGetResult(conn2, query2);
 row2 = sqlNextRow(sr2);
 while (row2 != NULL)
     {
     rgdId  	= row2[0];
 
     sqlSafef(query3, sizeof query3, "select min(start)-1, max(end) from rgdGeneRaw2cds where rgdId='%s'", rgdId);
 
     sr3 = sqlMustGetResult(conn3, query3);
     row3 = sqlNextRow(sr3);
 	      
     if  (row3 != NULL)
 	{
 	if ((row3[0] != NULL) && (row3[1] != NULL))
 	    {
 	    cdsStart  = row3[0];
        	    cdsEnd    = row3[1];	 
 	    printf("%s\t%s\t%s\n", rgdId, cdsStart, cdsEnd);
 	    }
 	}
     sqlFreeResult(&sr3);
     row2 = sqlNextRow(sr2);
     }
 sqlFreeResult(&sr2);
 
 hFreeConn(&conn2);
 hFreeConn(&conn3);
     
 return(0);
 }