4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/oneShot/randomEst/randomEst.c src/hg/oneShot/randomEst/randomEst.c
index bf87f6f..25bb89a 100644
--- src/hg/oneShot/randomEst/randomEst.c
+++ src/hg/oneShot/randomEst/randomEst.c
@@ -1,82 +1,82 @@
 /* randomEst - Select random ESTs from database. */
 
 /* Copyright (C) 2013 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 #include "common.h"
 #include "linefile.h"
 #include "hash.h"
 #include "cheapcgi.h"
 #include "jksql.h"
 #include "fa.h"
 #include "hdb.h"
 
 
 void usage()
 /* Explain usage and exit. */
 {
 errAbort(
   "randomEst - Select random ESTs from database\n"
   "usage:\n"
   "   randomEst database count output.fa\n"
   "options:\n"
   "   -xxx=XXX\n"
   );
 }
 
 void randomEst(char *database, int count, char *output)
 /* randomEst - Select random ESTs from database. */
 {
 struct sqlConnection *conn = sqlConnect(database);
 struct sqlResult *sr;
 char **row;
 int i, elIx, okCount = 0;
 struct slName *list = NULL, *el;
 FILE *f = NULL;
 char **array = NULL;
 struct dnaSeq *seq;
 struct hash *uniqHash = newHash(0);
 
 hSetDb(database);
 printf("Scanning database\n");
 sr = sqlGetResult(conn, NOSQLINJ "select acc,type,direction from mrna");
 while ((row = sqlNextRow(sr)) != NULL)
     {
     if (sameString(row[1], "EST") && sameString(row[2], "3"))
         {
 	el = newSlName(row[0]);
 	slAddHead(&list, el);
 	++okCount;
 	}
     }
 sqlFreeResult(&sr);
 printf("Got %d 3' ESTs\n", okCount);
 AllocArray(array, okCount);
 for (i=0, el = list; el != NULL; el = el->next, ++i)
     array[i] = el->name;
 
 printf("Selecting %d to put into %s\n", count, output);
 f = mustOpen(output, "w");
 for (i=0; i<count; ++i)
     {
     char *name;
     elIx = rand()%okCount;
     name = array[elIx];
     if (!hashLookup(uniqHash, name))
 	{
 	hashAdd(uniqHash, name, NULL);
 	seq = hRnaSeq(name);
 	faWriteNext(f, seq->name, seq->dna, seq->size);
 	freeDnaSeq(&seq);
 	}
     }
 }
 
 int main(int argc, char *argv[])
 /* Process command line. */
 {
 cgiSpoof(&argc, argv);
 if (argc != 4 || !isdigit(argv[2][0]))
     usage();
 randomEst(argv[1], atoi(argv[2]), argv[3]);
 return 0;
 }