4898794edd81be5285ea6e544acbedeaeb31bf78
max
  Tue Nov 23 08:10:57 2021 -0800
Fixing pointers to README file for license in all source code files. refs #27614

diff --git src/hg/oneShot/wgEncodeRegTfbsDedupeHelp/wgEncodeRegTfbsDedupeHelp.c src/hg/oneShot/wgEncodeRegTfbsDedupeHelp/wgEncodeRegTfbsDedupeHelp.c
index 71e5516..9284bd2 100644
--- src/hg/oneShot/wgEncodeRegTfbsDedupeHelp/wgEncodeRegTfbsDedupeHelp.c
+++ src/hg/oneShot/wgEncodeRegTfbsDedupeHelp/wgEncodeRegTfbsDedupeHelp.c
@@ -1,74 +1,74 @@
 /* wgEncodeRegTfbsDedupeHelp - Help remove dupes from list of TFBS efforts. */
 
 /* Copyright (C) 2012 The Regents of the University of California 
- * See README in this or parent directory for licensing information. */
+ * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
 #include "common.h"
 #include "linefile.h"
 #include "hash.h"
 #include "options.h"
 
 static char const rcsid[] = "$Id: newProg.c,v 1.30 2010/03/24 21:18:33 hiram Exp $";
 
 void usage()
 /* Explain usage and exit. */
 {
 errAbort(
   "wgEncodeRegTfbsDedupeHelp - Help remove dupes from list of TFBS efforts\n"
   "usage:\n"
   "   wgEncodeRegTfbsDedupeHelp in.tab picks.tab out.tab\n"
   "options:\n"
   "   -xxx=XXX\n"
   );
 }
 
 static struct optionSpec options[] = {
    {NULL, 0},
 };
 
 void wgEncodeRegTfbsDedupeHelp(char *inTab, char *picksTab, char *outTab)
 /* wgEncodeRegTfbsDedupeHelp - Help remove dupes from list of TFBS efforts. */
 {
 char key[256];
 struct hash *hash = hashNew(0);
 
 /* Build hash of picks. */
     {
     struct lineFile *lf = lineFileOpen(picksTab, TRUE);
     char *row[3];
     while (lineFileRow(lf, row))
         {
 	char *factor = row[0];
 	char *source = row[1];
 	char *id = row[2];
 	safef(key, sizeof(key), "%s & %s", factor, source);
 	hashAdd(hash, key, cloneString(id));
 	}
     }
 
 struct lineFile *lf = lineFileOpen(inTab, TRUE);
 FILE *f = mustOpen(outTab, "w");
 char *line;
 while (lineFileNextReal(lf, &line))
     {
     char *dupe = cloneString(line);
     char *row[11];
     chopLine(dupe, row);
     char *source = row[7];
     char *factor = row[8];
     safef(key, sizeof(key), "%s & %s", factor, source);
     char *pick = hashFindVal(hash, key);
     if (pick == NULL || stringIn(pick, line))
         fprintf(f, "%s\n", line);
     }
 carefulClose(&f);
 }
 
 int main(int argc, char *argv[])
 /* Process command line. */
 {
 optionInit(&argc, argv, options);
 if (argc != 4)
     usage();
 wgEncodeRegTfbsDedupeHelp(argv[1], argv[2], argv[3]);
 return 0;
 }